Sedimenticola thiotaurini: AAY24_03420
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Entry
AAY24_03420 CDS
T03943
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
seds
Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seds03032
]
AAY24_03420
03036 Chromosome and associated proteins [BR:
seds03036
]
AAY24_03420
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_03420
DNA replication proteins [BR:
seds03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AAY24_03420
Chromosome and associated proteins [BR:
seds03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AAY24_03420
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AAY24_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AKH19562
UniProt:
A0A0F7JVJ2
LinkDB
All DBs
Position
779953..780261
Genome browser
AA seq
102 aa
AA seq
DB search
MTKSELIDVIAKEQSHLAYRDVELAVKCMLEQMSQTLASGERIEIRGFGSFSLHFRPPRQ
GRNPKTGASVALAGKYVPHFKPGKELRERVNESAASGSKITG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgaattgattgacgtcatcgcaaaagaacagagccaccttgcataccgc
gatgtggagttggctgtgaagtgcatgctggagcagatgagtcaaaccctggcttccgga
gagcgtatagaaatccgtggttttggtagcttttctcttcacttccgtccaccaaggcag
gggcgtaatccgaagaccggtgcatcggtagcactggccggaaagtatgtgccgcatttt
aaaccgggtaaggaactgcgcgagcgggtaaacgaaagtgccgccagtggctccaaaatt
accggctaa
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