Sedimenticola thiotaurini: AAY24_04070
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Entry
AAY24_04070 CDS
T03943
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds00020
Citrate cycle (TCA cycle)
seds00190
Oxidative phosphorylation
seds00650
Butanoate metabolism
seds00720
Other carbon fixation pathways
seds01100
Metabolic pathways
seds01110
Biosynthesis of secondary metabolites
seds01120
Microbial metabolism in diverse environments
seds01200
Carbon metabolism
Module
seds_M00009
Citrate cycle (TCA cycle, Krebs cycle)
seds_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
seds_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AAY24_04070 (sdhA)
00650 Butanoate metabolism
AAY24_04070 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AAY24_04070 (sdhA)
00720 Other carbon fixation pathways
AAY24_04070 (sdhA)
Enzymes [BR:
seds01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AAY24_04070 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
Thi4
NAD_binding_8
GIDA
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
FAD_oxidored
NAD_binding_7
DUF5788
Motif
Other DBs
NCBI-ProteinID:
AKH19670
UniProt:
A0A0F7JXY8
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Position
complement(917142..918905)
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AA seq
587 aa
AA seq
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MTLARRRFDALIIGAGGAGLNAALQLANANLRVAVVSKVFPTRSHTVAAQGGVNAALANV
FEDNWHWHMFDTVKGSDYLGDQDAIEFMCREAIPTVYELEHNGVPFSRLDDGKIYQRAFG
GQSQNFGGAQAARTCAAADRTGHAILHTLYQQNIRARTHFFDEYFGIDLIRDEEGAILGA
LTLEIETGEPLLIEAKTTLLATGGGGQVFRTTSNAHINTGDGMAMALRAGVPLMDMEFFQ
FHPTGIAGRGMLITEGVRGEGGYLINKDGERFMERYAPNAKDLASRDVVSRAIVTEVKEG
RGCGPNADHVLLKVDHLGEDIIAKRLPGIRESSKIFAGVDPAVEPIPVFPTAHYMMGGIP
TDRLGHVVIPSSDGSEEIVPGLFAAGECACVSVHGANRLGGNSLLDILVFGRAAGQQIIN
HLKENPEHRAMDESSVEQAMSRLSRWEETGEGIPVRELRDEFRKVMEDHAGVFRTDEIMS
EGVEKVKEVREKLKDVRLGDQSKIFNTARIEALELENLIDIGMAIVLSALERKESRGAHS
RPDYTERDDENWMKHSVYFKEGDRLDYKPVQTKPLTVETFPPKPRVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgctagccagaagacgttttgatgcgctgatcatcggtgccggtggtgccggcctg
aatgcagcgctacagcttgccaacgccaacctgcgagttgctgttgtctcaaaagtattt
ccgacccgttcccatactgttgctgcccagggtggtgtgaatgccgctctggccaatgtc
tttgaagataattggcactggcacatgtttgacacggtcaagggctcggattatctgggt
gaccaggatgcgatcgagttcatgtgtcgtgaggcgatccccaccgtttacgagctggaa
cacaacggtgtgccgttctcacggctcgatgacggcaagatctaccagcgtgcattcggt
ggccagagccagaatttcggtggtgcccaggcggcacgcacctgcgccgctgccgaccgt
accggtcacgctatcctgcacaccctttatcagcagaacattcgcgcccgcacccatttt
tttgatgagtacttcggtatcgatctgatacgggatgaagagggggctatcctcggtgcg
ctgaccctggaaatcgagaccggtgagccgttgctgatcgaggccaaaaccacgctgctg
gcgacaggcggcggtggtcaggtgttcagaaccacctcgaatgcccatatcaataccggt
gatgggatggctatggcactgcgcgccggcgtgccattgatggacatggagtttttccag
ttccatccgaccggtatcgccggtcgtggcatgctgattaccgaaggcgtgcgtggtgag
ggtggttacctgatcaacaaggatggtgagcgcttcatggagcgttatgcacccaacgca
aaagatctggccagccgggacgtggtctcccgggctatcgtgaccgaggtgaaagaggga
cgtggttgtggacccaatgccgaccatgtactgctgaaagtggaccacctgggtgaagat
atcattgccaagcgtctgcccggtatccgcgagagctccaagatcttcgccggtgtggat
ccggcagtagaaccgatcccggtattcccaaccgctcactacatgatgggtggtattccc
accgaccgtctaggccacgtggtgataccttcttcggatggttctgaagagattgtgccc
ggactgttcgccgccggtgagtgtgcttgtgtctcggtgcatggtgccaatcgtctgggc
ggaaactcactgctggatatcctggtgtttggccgggctgccggtcagcagattatcaat
cacttgaaagagaatcccgaacacagggcgatggatgagtcgtcggtcgaacaggcgatg
tccagactcagccgctgggaggaaacgggtgagggcataccagtgcgcgaactgcgtgac
gagttccgcaaggtgatggaagatcatgccggcgtattccgtactgacgaaatcatgtcg
gagggtgtggagaaggtgaaggaggtccgggagaaactgaaggatgtccgcctgggtgat
cagagcaagatctttaatacggcaaggatcgaagcactggagctggaaaacctgatcgat
atcggcatggctattgtgctttctgcactggagcgtaaagagagtcgtggtgctcattcc
cggcctgactacaccgaacgggatgatgagaactggatgaaacattcggtctatttcaaa
gaaggtgaccgtctggattacaagccggttcaaaccaaaccgcttactgtcgaaaccttc
ccgccgaagccacgtgtctactga
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