Sedimenticola thiotaurini: AAY24_05215
Help
Entry
AAY24_05215 CDS
T03943
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
seds
Sedimenticola thiotaurini
Pathway
seds02024
Quorum sensing
seds03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAY24_05215
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AAY24_05215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seds03019
]
AAY24_05215
03036 Chromosome and associated proteins [BR:
seds03036
]
AAY24_05215
Messenger RNA biogenesis [BR:
seds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AAY24_05215
Chromosome and associated proteins [BR:
seds03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AAY24_05215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AKH19851
UniProt:
A0A0F7JTL4
LinkDB
All DBs
Position
complement(1169164..1169418)
Genome browser
AA seq
84 aa
AA seq
DB search
MSKGQSLQDPFLNTLRKERIPVSIFLVNGIKLQGQIESFDQFVVLLKNTVSQMVYKHAIS
TVVPARNVRLQMPGSDDATELGNS
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggggcaaagtctacaggaccctttcctcaacacgcttcgaaaagagcgtatt
cccgtatcgatcttcctggtgaatggaatcaagctacaggggcagattgaatcgtttgat
cagtttgtggtattgctgaaaaatacggtcagtcaaatggtatataaacatgccatttcc
actgtggttcccgcgaggaatgtgcggttgcagatgccgggtagtgatgacgccaccgaa
ctcggcaatagctga
DBGET
integrated database retrieval system