Sedimenticola thiotaurini: AAY24_05360
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Entry
AAY24_05360 CDS
T03943
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAY24_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_05360
Enzymes [BR:
seds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAY24_05360
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAY24_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_28
AAA_16
PIF1
AAA_7
CbiA
UvrD_C
nSTAND3
AAA
AAA_24
TrwB_AAD_bind
SRP54
Motif
Other DBs
NCBI-ProteinID:
AKH22070
UniProt:
A0A0F7K4F0
LinkDB
All DBs
Position
complement(1198611..1200443)
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AA seq
610 aa
AA seq
DB search
MRLKALLPLTDLDLHFARLIGRLAGDQCPELLTAAALTSHVTGAGDVCLPLDQWSDRKIG
DDGDAISLPGRAEWVTLLQESPVVGSPGEFKPLILDRAGRLYLQRYWAYEQQLSDLLRQR
SQQDLGGIDEEKLQQGLGLLFPPQPDLVVDWQKVAAAVAVRKRLAVISGGPGTGKTSTVV
RILALLQQQAANPLVIALAAPTGKAAARLQESIQIAREQLPMPAEVLETIPTRATTLHRL
MGSRPDRVQFRHDAHNPLPVDLLVIDEASMVDMALMAKVVAALPVGARLILLGDRNQLAS
VEAGAVLGDICGDQAGYTVDCRQWLERLTGQILPDEGLALNPLADAVVQLRHSYRFGGQS
GIGQLAEAVNRGDGETARRLLDQAQPADVRQLDREEEPVAFAAGIYRDYLQRIAGGAAVG
EIFAAFDSFRVLCALRSGPAGVAGLNQEIRQHLEQDGLIDRGVTWYPGRPVLITRNDHNL
KLYNGDIGILLTHDSGLLQVCFQTADGLRWVSPARLPPHETAFAMTVHKSQGSEFDRVLL
VLPERDSPLLSRELIYTGLTRSRRKFILSDRRGMLLPALARRTRRASGLREKLWGDENRG
ADVTAITVER
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaaagcgctgctcccgctgaccgacctggatctccattttgcccggttgata
gggcggctggccggggatcagtgcccggaactgttgactgctgccgccctgacgagtcat
gtcaccggtgcgggtgatgtctgtttgccgcttgaccagtggagtgaccgcaagatcggt
gacgacggggatgcaatcagcctgccgggtcgggcagagtgggtcactctgttgcaggag
tccccggttgttggatctcccggtgagttcaaacccctgatcctggatcgggcggggcgc
ctgtatctgcaacgctactgggcttacgagcagcaactgtccgatttgctgcggcaacgc
agtcagcaggatctgggggggatcgatgaagagaaactgcaacagggactggggttgctg
tttcccccgcaaccggatctggttgtggactggcagaaagtggctgccgccgttgcggta
aggaaacgactggccgttatttcaggggggccggggactggtaagaccagtaccgtggta
cggattctggcactactgcaacagcaggcggccaatccgttggtcatcgctttggcagcg
ccaaccggaaaagcggctgcccgcctgcaggagtcgatccagatagcccgggagcagttg
cccatgccggcggaagtgctggagacgatcccgacccgggcgacgactctgcaccggctg
atggggagtcgacccgaccgggtccagttcaggcatgatgcccacaatcccctgccggtg
gatcttctggtcatcgacgaggcatcaatggtggatatggcactgatggccaaggtggtg
gctgcgttgccggtcggcgcgcgactgattctgctcggtgaccgcaatcaactggcttcg
gtggaggccggtgcggtgttgggggatatctgtggagaccaggcgggttatacagtggat
tgccgacagtggctagagcggttgaccggccagatcctgcccgatgaggggctggcgctg
aatccgctggcggacgccgtggtgcaattgcggcacagttaccgttttggtggtcagagc
ggcattggacagctggccgaggcggtaaaccggggggatggcgagaccgcgcggcggtta
ctggaccaggcccaaccggcggatgtccgacaactggaccgggaggaggagccggtagca
tttgccgctggcatctatcgggactatttgcagcggattgccgggggggcggcggttggg
gagatttttgccgctttcgacagttttcgcgtgctttgcgctctgcgctcggggccagcc
ggtgttgcaggtctgaatcaggagattcgtcaacaccttgagcaggacggactgatcgat
cggggtgtgacctggtatccggggcgaccggtgttgattacccggaatgaccataacctg
aaactctacaatggggatatcggtatcctgttgacgcacgattcgggcctgctgcaggtc
tgttttcagaccgcggacggactccgctgggtcagtccggcgcgactgcctccccatgaa
acggcttttgccatgacggtacacaagagccagggctcggaatttgaccgggtgctgctg
gttctgccggagcgggattcgccactactcagccgcgaactgatttacaccggccttacc
cgaagtcgccggaagtttatactttcagaccggcgtgggatgttgcttccggcgctggcc
agacgcactcgccgggcgtccgggctgcgggagaagctctggggtgatgaaaataggggt
gcagatgtgaccgccatcaccgttgaaagatga
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