Sedimenticola thiotaurini: AAY24_06100
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Entry
AAY24_06100 CDS
T03943
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
seds
Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seds03016
]
AAY24_06100
Enzymes [BR:
seds01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AAY24_06100
Transfer RNA biogenesis [BR:
seds03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAY24_06100
Prokaryotic type
AAY24_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKH19991
UniProt:
A0A0F7JTW8
LinkDB
All DBs
Position
complement(1356829..1357590)
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AA seq
253 aa
AA seq
DB search
MGIEYDGSSFHGWQLQKSGVRTVQLMLETALSKVAAHPVRTHCAGRTDTGVHGEGQVIHF
DTPSVRAMRGWLLGTNVNLPDDVNVNWVREVPESFHARFSATSRSYRYVILNRPTRSAIW
RHRAVWIHQSLDVEPMQAAAEHLLGTHDFSSYRAVGCQAKSPVRTITRLQVTRQDDRVVI
EVTANAFLHHMVRNIAGVLIAIGKGEQPVEWSREVLEYRDRTLGGVTAPPEGLYLVHVGY
PEEYRLPIHGGGE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgagtatgacggctcatcgttccatggctggcagttgcagaaatccggtgtg
cgcaccgtacaactgatgctggagaccgctctctctaaagtggcggcccatccggtacgt
acccattgtgccggcagaaccgatacaggcgtccatggagaaggccaggtgattcacttt
gacaccccctcggtacgggccatgcggggctggttgctggggaccaacgtcaatctgcct
gatgatgtgaatgtgaactgggtccgggaagtgccggaatcgttccatgcgcgcttttcc
gccaccagccgcagttatcgctatgtgatactgaaccgacccacccgttcagcgatctgg
cgtcaccgggcagtctggattcaccagtccctggatgtggaacccatgcaggcggcggct
gaacatctgctgggtacccatgatttctcctcctaccgtgcggtgggctgccaggccaaa
agtccggtcagaaccatcaccaggctccaggtgacccgccaggatgatcgggtcgtgatc
gaagtgaccgccaatgcctttctgcaccacatggtccgcaacattgccggcgtgttgatt
gccattggcaagggtgagcagccggtggagtggagccgggaggtgctggagtatcgggat
cgcaccctgggtggggtgaccgccccgccggaagggctctacctggtgcatgtgggctat
ccggaggagtaccggttgccaatccatggcggcggggagtag
DBGET
integrated database retrieval system
