KEGG   Sedimenticola thiotaurini: AAY24_12360
Entry
AAY24_12360       CDS       T03943                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
seds  Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:seds00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seds03032]
    AAY24_12360
   03400 DNA repair and recombination proteins [BR:seds03400]
    AAY24_12360
Enzymes [BR:seds01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AAY24_12360
DNA replication proteins [BR:seds03032]
 Prokaryotic type
  DNA Topoisomerases
   AAY24_12360
DNA repair and recombination proteins [BR:seds03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AAY24_12360
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_Top1 Toprim Toprim_4 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AKH21012
UniProt: A0A0F7JZ54
LinkDB
Position
2688857..2691136
AA seq 759 aa
MKLVIVESPAKCKTIKKYLGPEYEVLASYGHVRDLVPKEGAVDPNNDFSMKYQVIERNDR
HVQAIAKALKKSDTLLLATDPDREGEAISWHLYELLKKRKLLKDKEVQRVVFNEITQKAL
QEAVAKPRDLSMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIVER
EEEIEAFVAREYWTIEADLVKQEQPFSAKLTHYRGNKLEQFDINNGDAAAAAEQQLLTAA
GGTLTVEKVQKKQRKRNPAAPFTTSTLQQEAARKLGFTAQRTMRTAQQLYEGIDTGSGAT
GLITYMRTDSVNLSDDAIAELREFITKQYGADQLPKQPRSFKTKSKNAQEAHEAIRTTSI
QRTPESLRAHLTKDQYRLYELIWKRTVACQMIHATIDTVAADLSCGEGNTFRANGSTVAS
PGFMAVYMEGVDDAKKGDNDEKLLPPLQEGEQITLNKIRPEQHFTEPPPRYSEASLVKAL
EEHGIGRPSTYASIISTLQDREYVQLEKKRFHPTDVGRVVNKFLTQYFTRYVDYDFTARL
EDELDAVSRGEQEWVPLLRQFWAPFKERIDHTQENVKRSDVTHEALDEACPSCGKPLSIR
LGRHGRFIGCTNYPECDYTRDLNGDKKEQEEPTIVEGRKCPECQSDLVIKRGKYGKFIGC
SNYPNCRHIEPLEKPEDTGVTCPKCNKGTLMKRKSRRGKVFYSCSTYPDCDYATWNEPIA
EPCPSCGWPILTIKTTKRKGTEKVCPQKDCSYSEPVEES
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgaagctggtaattgtagaatcacccgccaagtgtaaaaccatcaagaaatacctggga
ccggagtatgaagttctggcctcttacggccacgtgcgcgacctggtacccaaagagggc
gcagtggaccccaacaacgatttcagcatgaagtaccaggtcattgagcggaatgaccgg
catgtgcaggccatcgccaaggcgctgaagaaatcggacaccctgttactggccactgac
ccggatcgcgaaggcgaggcgatctcctggcacctctatgaactgctgaagaagcgcaag
ctgctgaaggacaaggaggtgcagcgggtggtgttcaacgagatcacccagaaggcgctg
caggaggcggtggcgaaaccgcgcgatctgtccatggatctggtcaatgcgcagcaggcg
cgccgcgccctggactatctggtgggtttcaacctgtcaccgctgctgtggaaaaagatc
cgccgtggactatccgcaggacgcgtgcagagtccggctctgcgcatgattgtggaacgg
gaggaggagattgaagccttcgtcgcccgggagtactggactattgaagcggacctggtc
aaacaggagcagccattcagcgccaagctgacccattaccggggcaacaagctggaacag
tttgatatcaacaacggcgacgcggcagcggcagccgaacagcaactgctgacggcagcg
ggtggcacgctgacggtcgaaaaggtccagaaaaaacagcgcaagcgcaatcccgcggct
cccttcaccacctccaccctgcaacaggaggcggcccgcaaactgggtttcaccgctcaa
cggaccatgcgcaccgcccaacaactgtatgagggaatagataccggcagcggcgctacc
ggtctgatcacctatatgcgtaccgattcggtcaacctgtcggatgatgccatcgcggag
ttgcgcgaattcatcaccaagcagtatggcgctgatcaactgcccaagcagccgcgcagc
ttcaagaccaagtcaaagaacgcccaggaggcccatgaggcgatccgaaccacgtcgatc
cagcgcactcccgagtcgttacgtgcccacctgaccaaggaccagtaccgactctacgaa
ttgatctggaaacggaccgtggcctgccagatgatccacgccaccattgataccgtggcg
gccgatctctcctgcggagaaggcaataccttccgcgccaacggctccaccgtggccagc
cccggcttcatggcggtctacatggagggggtggatgacgccaagaagggggacaacgac
gagaagctgttacccccgctgcaggagggcgaacagatcaccctgaacaagatccgcccg
gaacagcacttcaccgaaccgccaccccgctacagcgaggcgagcctggtcaaggcgctg
gaggaacacggcatcggccgtccctccacctacgcatcgatcatctccaccctgcaggat
cgggaatacgtgcagctggagaagaagcgtttccaccccaccgacgtgggccgggtggtg
aacaagttcctgacccagtacttcacccgctacgtggattacgactttaccgcacggctg
gaggacgaattggacgccgtgtcccgtggcgaacaggagtgggtgcccctgttgcgccag
ttctgggccccctttaaagagcgtatcgatcacacccaggagaacgtcaagcgcagcgac
gtgacccatgaggccctggatgaggcctgcccctcctgcggcaaaccgctgtcgatccgc
ctgggacgtcatggccgattcatcggctgtaccaactaccccgaatgcgactacacccgg
gatctgaatggcgacaagaaggagcaggaagagcccaccatagttgaaggcagaaagtgt
cctgagtgccaatccgacctggtgatcaagcggggcaaatacggcaagttcatcggttgc
agcaattatcctaactgccgccatatcgagccgctggaaaagcctgaggataccggggtc
acctgcccgaaatgcaacaagggcacgctgatgaagcgcaaatcccggcgcggcaaggta
ttctactcctgctcaacctacccggattgcgactacgccacctggaatgagccgattgca
gaaccctgccccagttgcggctggccgattctgactatcaaaaccaccaaacggaagggc
accgagaaggtctgtccgcagaaggattgctcctattcggaaccggttgaggagtcctga

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