Sedimenticola thiotaurini: AAY24_12360
Help
Entry
AAY24_12360 CDS
T03943
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
seds
Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seds03032
]
AAY24_12360
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_12360
Enzymes [BR:
seds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AAY24_12360
DNA replication proteins [BR:
seds03032
]
Prokaryotic type
DNA Topoisomerases
AAY24_12360
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAY24_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AKH21012
UniProt:
A0A0F7JZ54
LinkDB
All DBs
Position
2688857..2691136
Genome browser
AA seq
759 aa
AA seq
DB search
MKLVIVESPAKCKTIKKYLGPEYEVLASYGHVRDLVPKEGAVDPNNDFSMKYQVIERNDR
HVQAIAKALKKSDTLLLATDPDREGEAISWHLYELLKKRKLLKDKEVQRVVFNEITQKAL
QEAVAKPRDLSMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIVER
EEEIEAFVAREYWTIEADLVKQEQPFSAKLTHYRGNKLEQFDINNGDAAAAAEQQLLTAA
GGTLTVEKVQKKQRKRNPAAPFTTSTLQQEAARKLGFTAQRTMRTAQQLYEGIDTGSGAT
GLITYMRTDSVNLSDDAIAELREFITKQYGADQLPKQPRSFKTKSKNAQEAHEAIRTTSI
QRTPESLRAHLTKDQYRLYELIWKRTVACQMIHATIDTVAADLSCGEGNTFRANGSTVAS
PGFMAVYMEGVDDAKKGDNDEKLLPPLQEGEQITLNKIRPEQHFTEPPPRYSEASLVKAL
EEHGIGRPSTYASIISTLQDREYVQLEKKRFHPTDVGRVVNKFLTQYFTRYVDYDFTARL
EDELDAVSRGEQEWVPLLRQFWAPFKERIDHTQENVKRSDVTHEALDEACPSCGKPLSIR
LGRHGRFIGCTNYPECDYTRDLNGDKKEQEEPTIVEGRKCPECQSDLVIKRGKYGKFIGC
SNYPNCRHIEPLEKPEDTGVTCPKCNKGTLMKRKSRRGKVFYSCSTYPDCDYATWNEPIA
EPCPSCGWPILTIKTTKRKGTEKVCPQKDCSYSEPVEES
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtaattgtagaatcacccgccaagtgtaaaaccatcaagaaatacctggga
ccggagtatgaagttctggcctcttacggccacgtgcgcgacctggtacccaaagagggc
gcagtggaccccaacaacgatttcagcatgaagtaccaggtcattgagcggaatgaccgg
catgtgcaggccatcgccaaggcgctgaagaaatcggacaccctgttactggccactgac
ccggatcgcgaaggcgaggcgatctcctggcacctctatgaactgctgaagaagcgcaag
ctgctgaaggacaaggaggtgcagcgggtggtgttcaacgagatcacccagaaggcgctg
caggaggcggtggcgaaaccgcgcgatctgtccatggatctggtcaatgcgcagcaggcg
cgccgcgccctggactatctggtgggtttcaacctgtcaccgctgctgtggaaaaagatc
cgccgtggactatccgcaggacgcgtgcagagtccggctctgcgcatgattgtggaacgg
gaggaggagattgaagccttcgtcgcccgggagtactggactattgaagcggacctggtc
aaacaggagcagccattcagcgccaagctgacccattaccggggcaacaagctggaacag
tttgatatcaacaacggcgacgcggcagcggcagccgaacagcaactgctgacggcagcg
ggtggcacgctgacggtcgaaaaggtccagaaaaaacagcgcaagcgcaatcccgcggct
cccttcaccacctccaccctgcaacaggaggcggcccgcaaactgggtttcaccgctcaa
cggaccatgcgcaccgcccaacaactgtatgagggaatagataccggcagcggcgctacc
ggtctgatcacctatatgcgtaccgattcggtcaacctgtcggatgatgccatcgcggag
ttgcgcgaattcatcaccaagcagtatggcgctgatcaactgcccaagcagccgcgcagc
ttcaagaccaagtcaaagaacgcccaggaggcccatgaggcgatccgaaccacgtcgatc
cagcgcactcccgagtcgttacgtgcccacctgaccaaggaccagtaccgactctacgaa
ttgatctggaaacggaccgtggcctgccagatgatccacgccaccattgataccgtggcg
gccgatctctcctgcggagaaggcaataccttccgcgccaacggctccaccgtggccagc
cccggcttcatggcggtctacatggagggggtggatgacgccaagaagggggacaacgac
gagaagctgttacccccgctgcaggagggcgaacagatcaccctgaacaagatccgcccg
gaacagcacttcaccgaaccgccaccccgctacagcgaggcgagcctggtcaaggcgctg
gaggaacacggcatcggccgtccctccacctacgcatcgatcatctccaccctgcaggat
cgggaatacgtgcagctggagaagaagcgtttccaccccaccgacgtgggccgggtggtg
aacaagttcctgacccagtacttcacccgctacgtggattacgactttaccgcacggctg
gaggacgaattggacgccgtgtcccgtggcgaacaggagtgggtgcccctgttgcgccag
ttctgggccccctttaaagagcgtatcgatcacacccaggagaacgtcaagcgcagcgac
gtgacccatgaggccctggatgaggcctgcccctcctgcggcaaaccgctgtcgatccgc
ctgggacgtcatggccgattcatcggctgtaccaactaccccgaatgcgactacacccgg
gatctgaatggcgacaagaaggagcaggaagagcccaccatagttgaaggcagaaagtgt
cctgagtgccaatccgacctggtgatcaagcggggcaaatacggcaagttcatcggttgc
agcaattatcctaactgccgccatatcgagccgctggaaaagcctgaggataccggggtc
acctgcccgaaatgcaacaagggcacgctgatgaagcgcaaatcccggcgcggcaaggta
ttctactcctgctcaacctacccggattgcgactacgccacctggaatgagccgattgca
gaaccctgccccagttgcggctggccgattctgactatcaaaaccaccaaacggaagggc
accgagaaggtctgtccgcagaaggattgctcctattcggaaccggttgaggagtcctga
DBGET
integrated database retrieval system