Sedimenticola thiotaurini: AAY24_13275
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Entry
AAY24_13275 CDS
T03943
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds03420
Nucleotide excision repair
seds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAY24_13275 (uvrD)
03430 Mismatch repair
AAY24_13275 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_13275 (uvrD)
Enzymes [BR:
seds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAY24_13275 (uvrD)
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAY24_13275 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AAY24_13275 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AKH21167
UniProt:
A0A0F7JZT4
LinkDB
All DBs
Position
2888661..2890829
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSHILEGLNDAQREAVSAPPGGMLVLAGAGSGKTRVLVHRIAWLLQVVGASPWNILAV
TFTNKAAREMKGRIEDLLGQPVGGMWVGTFHGLAHRLLRAHWKDANLPQSFQILDSDDQY
RMIKRLLKAMDLDEARWPPRQAQWFINGRKDEGVRPQHMDDGGDPYLRTMIRIYAEYQST
CDRGGVVDFAELLLRAHELLRDRPDILHHYRERFQHILVDEFQDTNTIQYAWLRLLAGEH
NRLFAVGDDDQSIYGWRGARVEHIRDFRKHFPDAPLLRLEQNYRSTATILKAANAVIANN
PSRLGKELWTDGSEGEPILLYNAFNEVDEARFVVERIRHFTEEGHRRDECAILYRSNAQS
RQFEEALIQAQLPYRVYGGLRFFERAEIKDALAYLRLVANPEEDPSFERAVNQPPRGIGP
RTLDAVRAHARDFGCSLWQASRELVEGGAMAKRAAGALNGFLELIAEQQASTQGLALHEI
ADQVISSSGLAEHFRKSRDGKGQDRVENLEELVNAARQFTYETVPEEDELDPLTAFLSHA
ALEAGENQGDQFEDCVQLMTLHSAKGLEFPLVFMAGVEEKLFPHSMSAEDPERLEEERRL
CYVGMTRAMEQLYLTYAESRRLHGSESYPLPSRFLREIPAELVREIRSRPQVSRPVYGGA
VSSGFADEACGFQLGQRVLHPKFGEGVVLNAEGQGGSARVQVNFEQAGAKWLVVAYANLQ
QI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacatattctcgaaggtttgaacgatgcccagcgggaggcggtctccgcc
ccgccgggcggtatgctggtgctggccggggcaggcagtggcaaaacccgggtgctggtg
caccggatcgcctggttgttgcaggtggtgggtgcgtcgccctggaacatcctggctgtc
acctttaccaacaaggcagcccgggagatgaaggggcgtattgaagatctgctcggccag
ccggtgggtggtatgtgggtcggtaccttccatggtctggcccatcgtctgctgcgggcg
cactggaaggatgccaatctgccgcagagttttcagattctggactctgacgatcagtac
cgcatgatcaaacggctgctcaaggccatggatctggacgaggcacgctggccaccgcgg
caggcccagtggtttatcaacggccgcaaggatgagggagtacggccccagcacatggat
gatggaggcgatccctatctgcgcaccatgatccgtatctacgccgagtaccagtccact
tgtgatcgtggtggcgtggtggattttgccgaactgctgctgcgtgcccatgaactgctg
cgcgaccgaccggatattctgcaccactatcgtgagcgctttcagcatatcctggtggat
gagttccaggacaccaacactattcagtacgcctggttgcgactgctggccggggaacat
aaccgcctgtttgccgtgggtgatgatgaccagtccatctacggctggcgcggcgcccgg
gtggaacatatccgggatttccgcaaacacttccccgatgcgccgttgctgcgactggaa
cagaactaccgctccaccgccaccatcctgaaggcggccaatgcggtgatcgccaacaac
ccgtcccggctgggcaaggagctctggactgacggcagcgagggtgagccgattctgctc
tataacgccttcaatgaggtggatgaggcgcgcttcgtggtggagcggattcgccatttc
accgaagagggtcaccgccgggatgagtgtgccatcctgtaccgctccaacgcccagtcg
cggcagtttgaagaggccctgatccaggcccagctgccctaccgggtctatggcggtctg
cgattcttcgagcgggcagagatcaaggatgccctcgcctacctgcgcctggtggcgaat
ccggaagaagatccctcttttgagcgggcggtgaatcagccgccgcggggtatcggcccg
cgcaccctggatgcggtccgcgcccacgcccgggatttcggctgctccctgtggcaggca
tcccgggagctggttgaaggtggtgccatggccaagcgggcggccggtgcgttaaacgga
ttcctggagctgatcgccgagcaacaggccagtacccaggggctggcgctgcacgaaatc
gccgaccaggtgatctcgtcctccgggctggcagagcatttccgcaaaagtcgtgacggc
aaggggcaggaccgggtggagaacctggaggagttggttaacgcggcgcgccagttcacc
tacgagacggttccggaagaagatgagctggatccgttgaccgcgttcttatcccatgcg
gctttggaggccggggagaaccagggcgaccagttcgaggattgtgtgcagctgatgacc
ctccactcggccaaggggctggagtttccgctggtgttcatggccggggtggaggagaag
ttgttcccgcacagcatgtcggcggaagatcccgagcggctggaggaggagcggcgactc
tgctacgtggggatgacccgggctatggagcagctataccttacctacgccgagagtcgg
cgcctgcatggcagtgaatcctatcccctgccctcccggttcctgcgcgagatccctgct
gaactggtacgggagattcgctcccgtccgcaggtgagtcgtccggtctatgggggggcg
gtatccagtggattcgccgatgaagcctgtggtttccagctgggccagcgggtactgcat
ccgaaatttggtgaaggggtggtgctgaatgccgagggtcagggcggcagcgcccgggta
caggtgaactttgaacaggcgggtgccaagtggctggtggtcgcctacgccaacctgcaa
cagatctag
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