Sedimenticola thiotaurini: AAY24_13730
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Entry
AAY24_13730 CDS
T03943
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAY24_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seds03400
]
AAY24_13730
Enzymes [BR:
seds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAY24_13730
DNA repair and recombination proteins [BR:
seds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAY24_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
Zn_ribbon_PriA
ResIII
Helicase_C
WHD_PriA
AAA_22
Zn_ribbon_6
AAA_30
HypA
Motif
Other DBs
NCBI-ProteinID:
AKH21248
UniProt:
A0A0F7K2U3
LinkDB
All DBs
Position
2993963..2996164
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AA seq
733 aa
AA seq
DB search
MPEQLILRVAVPAPLHHCFDYLPPDDVAADRLIPGVRVRVPFGRGERCGVLLELVSPGEG
DGRRLKAAGAILDPQPLFSADDLALLRWAAGYYHHPIGEVIANALPVRLRKGEAPVPIRQ
RIWSLTPLGKQQERSALRRAPKQAELLDLLRESGGSLEQTQLLQICGSCRPALKALADKD
WISVDERLPEAPGAAPPPAPSRLNGDQQSAVDGVDLERFDACLLDGVTGSGKTEVYLELV
GRVLAKGRQALVLVPEIGLTPQLIRRFERRLGQGLAVLHSGLAAGERERAWHLARLGHAA
VVLGTRSALLTPLPRLGLIVVDEEHDLSFKQQDGFRYSARDLAVIRAQRTGCPVILGSAT
PSLESLQNARAGRYTHLRLTQRAGEAKPARMDLLDIRSVRMEAGLSPVLLQKLRETLDAG
NQALLFINRRGFAPIVTCHACGWVAQCRRCDARMTLHAASRLLWCHHCGSQRRQDDKCPE
CGDTDLRSLGQGTERVEQVLASCFPDVGIARIDRDSTRRKGSLDQLLNGIRTGKYSLLLG
TQMLAKGHHFPDVTLVGILDVDQGLFGADFRAAERMAQLIIQVAGRAGRAEKPGRVLIQT
RHPDHPMMQLLVHRGYAAFADEMLAERQAAAFPPFSYQALLRAEAPREQAPREFLDEARE
LAENLSGGRVELWGPVPAPMERRAGRYRAHLLLQADQRTDLQRLLSAWVHRLAVLKSARR
VRWSIDVDPQEMF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaactgatcctccgggtcgccgtaccggccccgcttcaccactgctttgac
tatctgccaccggatgatgtggcggctgaccggctgatcccgggggtgcgtgtgcgggtg
ccatttgggcgtggtgaacgctgtggtgtgctgctggaactggtctcgccgggggaaggt
gacgggcgccgcctgaaggcggccggcgctatcctggacccgcagcccctgttttccgcc
gacgatctggcactgttgcgctgggcggcaggctattaccaccacccgatcggggaggtg
attgccaacgctttgccggtgcggttacgcaaaggggaggcgccggttcctattcggcag
cggatctggtcattgacaccgctcggcaaacaacaggagcggagcgcactcaggcgcgcc
ccgaaacaggcggaactactggatttgctgcgggagtcggggggcagcctggaacagact
cagcttctgcagatctgcgggagctgccggccggctttgaaagcgctggccgataaagat
tggatcagtgtggatgaacgattgccggaggcccctggggcggccccccctcccgcccca
tcgcgcctcaatggggatcagcaaagcgcggtggatggagtcgatctggaacgctttgac
gcctgtctgctggatggggtgaccggtagcggcaagaccgaggtctacctggaattggtg
ggacgggtactggcaaagggacgccaggccctggtactggtgccggagatcggcctgacc
ccgcagctgatccgtcgctttgagcgacgccttgggcaggggctggcggtgctccattcc
ggtttggcagccggtgaacgggagcgcgcctggcacttggcccggctgggtcacgccgcg
gtggtgctgggtacccgctcggctctgctgactccgctgccccggctcggtctgattgtg
gtggatgaggagcatgatctgtcattcaagcagcaggatggatttcgttattcggctcgg
gatctggcggtgatccgggcccagcgcaccggctgtccggtgatcctgggcagtgccacc
ccgtcactggagtcactgcagaatgcccgtgccgggcgctatacccatctgcgcctgacg
caacgggccggcgaggccaagccggcgcgcatggatctgctggatatccgctcagtgcgc
atggaggcgggactctcgccggtgctgctgcagaagttgcgggagactctggatgccggc
aatcaggcattgctgtttatcaaccggcgcggattcgcaccgattgtcacttgccacgcc
tgtggctgggtggcccagtgtcgccgttgtgatgcccgcatgaccctgcacgccgccagc
cgactgctgtggtgtcaccactgtgggtcacagcggcggcaggatgataaatgccccgag
tgtggtgacaccgatctgcgcagcctgggacaggggacggaacgggttgagcaggtgttg
gccagttgttttcccgatgtgggcatcgcccgtatcgaccgggacagtacccgccgcaag
gggagtctggatcaactgctgaacggtatccgtacaggtaagtactcactcctgttgggc
acgcagatgctggccaaggggcaccactttccggatgtgaccctggtgggtatcctggat
gtggatcagggcctgttcggggccgacttccgtgccgcggagcgcatggcccagttgatc
attcaggtggctggtcgggccgggcgggcggaaaaaccgggccgggtgctgatccagacc
cgccatcccgaccatccgatgatgcagttgctggtgcatcggggctatgccgcttttgcc
gacgagatgctggcggagcgtcaggcggctgcttttccaccgttcagttaccaggccctg
ctgcgggctgaggcgccccgggagcaggcaccccgggagtttctggacgaggcccgggag
ctggcggaaaacctttccggggggcgggtcgagctgtgggggccggtaccggctccaatg
gagcggcgggccggacgctaccgtgcccacctgctgctacaggcggatcagcgtaccgat
ctgcaacggttgttatccgcctgggtacatcgcctggcggtgctcaagtcggcccggcgg
gtgcgctggtctatcgacgtggatccccaggagatgttctga
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