Sedimenticola thiotaurini: AAY24_15500
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Entry
AAY24_15500 CDS
T03943
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
seds
Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seds03009
]
AAY24_15500
Enzymes [BR:
seds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAY24_15500
Ribosome biogenesis [BR:
seds03009
]
Prokaryotic type
rRNA helicases
AAY24_15500
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKH22312
UniProt:
A0A0F7K3B2
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All DBs
Position
complement(3361847..3363160)
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AA seq
437 aa
AA seq
DB search
MLQTLDDLGLNQATPIQQQAIPVALERQDLIASAETGSGKTFAFLLPTLHHLLNTSAPES
GTRVLILVPTRELGHQILKQGQKLIKGTRLQIGLITGGESFKYQRALFRKNPEMIVATPG
RLLEHLEQGTPDFRDLEVLILDEADRMLDMGFSEDVLNITSQCNPARQTLLFSATLSHRG
LKAITDTLLRDPVSISLNTVRDRHQNITQQIIPSDDKLHKQRQLAWLLLHETFDKALVFT
NTRLQADALGPELRKQGVRAGVLHGDMGQDERNQIMALLRQGTIKVLVATDVAARGLDIK
GVDLVINFDMARSGKDYVHRIGRTGRAGQPGLAISLVSHQEWNLMSGIERYLKHEFERRL
IKEIAGKYRGPKRLKTSGKAAGGKKKTATDKPAKSGARKPKQRLRDRKNIGKRRKPSSNP
GDSSPREAGHKPLTRKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ctgctccagacgctcgacgacctgggactgaaccaggccaccccgatccagcagcaggcg
ataccggtggcactggaacggcaggatctgatcgccagcgccgaaaccggcagcggcaag
accttcgccttcctgctgccgaccctgcaccatctgctgaacacctcggcaccggagagt
ggcacccgggtgctcatactggtaccgacccgggaactgggtcaccagatcctcaagcag
ggccagaaactgatcaagggtacccgcctgcagatcggactgatcaccggcggagagtca
ttcaagtaccagcgcgccctgtttcgcaagaacccggagatgatagtggccacaccgggc
cgcttgctggagcatctggaacagggcacccccgatttccgcgacctggaggtactgatc
ctggatgaggcggaccgcatgctggacatgggattcagcgaggatgtgctcaacattacc
agccaatgtaatccggcccgccagaccctgctgttctccgccaccctgagtcaccgcggt
ctgaaagcgatcaccgacacactgctgcgtgatccggtcagcatcagtctgaataccgtg
cgcgaccggcatcagaacatcacccagcagatcatcccgtccgatgacaagctgcacaaa
cagcggcaactcgcctggctgctgctgcatgagacgtttgacaaggcgctggtgtttacc
aacacccggctgcaggccgacgccctgggcccggaactgcgcaaacagggggtgcgggcc
ggggttctccacggtgacatggggcaggatgagcgtaatcagatcatggccctgctgcga
cagggaaccatcaaggtgctggtggccaccgacgtggccgcccggggcctggacatcaag
ggtgtggatctggttatcaacttcgatatggcccgcagcggcaaggattatgtgcaccgg
atcgggcgcaccggtcgggccggacaaccgggactggcgatctccctggtcagccatcag
gagtggaacctgatgagcggtatcgagcgctacctgaagcatgagttcgaacggcgcctg
atcaaggagattgccggaaagtaccggggcccgaaaagactcaagacatcgggcaaggcc
gccggcggcaaaaagaaaacggcaaccgacaagccggcaaagagcggcgccagaaaaccc
aagcagcggctgcgggatcggaaaaatatcggcaaacgccgtaaaccgagcagtaatccc
ggtgacagcagcccccgtgaagcgggccacaaacccctgacccgaaaaaagtag
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