Sedimenticola thiotaurini: AAY24_15875
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Entry
AAY24_15875 CDS
T03943
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
seds
Sedimenticola thiotaurini
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seds03009
]
AAY24_15875
Enzymes [BR:
seds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AAY24_15875
Ribosome biogenesis [BR:
seds03009
]
Prokaryotic type
rRNA helicases
AAY24_15875
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
AAA_30
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
AKH21591
UniProt:
A0A0F7JZ61
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All DBs
Position
3447593..3448981
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AA seq
462 aa
AA seq
DB search
MNPTAFASLNLHDALLNNLASLGYDRMTPIQSQSLPPILAGRDVIAQGKTGSGKTAAFGL
GLLQKLDVKRFRIQGLVLCPTRELADQVAREIRRLGRGIHNIKVLTLCGGTPFGPQVGSL
EHGAHIIVGTPGRIEDHLGRGTLKLDKVSTLILDEADRMLDMGFQEVLERIVDQLPQRRQ
TLLFSATFPDQIQAIARLILSQPVTVQVESSHDSASIEQHFYKVKDNKQRLAALRLLLLQ
FRPESALVFCNTRKESQAVADSLVQCGFSALALHGDLEQRDRDQMLIRFANRSASVLVAT
DVAARGLDIDALDLVINYHISHDAESHLHRIGRTGRAGSKGIACALYSEKESHRVAQLEA
GIDPILDSEPLPPLALLEQAALKPAMATLQIDGGKKQKIRPGDILGALTGERGITGQQVG
KINIADNWAFVAVSICAVKPALKKLTQGKLKGRSFRVRLLED
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcccaccgccttcgcttcactcaatctgcatgacgccctgctgaacaatctggcc
tcgctcggctatgaccggatgacaccgattcagagccaaagcctgccacccattctggcg
ggccgggatgtgattgcccagggcaagaccggatcgggtaaaaccgcggcatttggcttg
gggctgttgcagaaactggatgttaaacggtttcggatacaggggctggtgctctgcccg
acccgggaactggcggaccaggtggcccgggagattcgccgtctgggccggggtatccat
aacatcaaggtgctgaccctctgcggtggcacgccgtttggcccccaggtgggttcactg
gagcacggcgcccacatcattgtggggacaccgggccgcattgaggatcacctgggccgg
ggtacgctgaaactggacaaggtgagcaccctcattctggatgaggcggaccgcatgctg
gatatgggttttcaggaggtgctggagcgcattgtcgatcaactgcctcagcggcgtcag
acactactgttcagcgccacctttcccgatcagatccaggccatcgcccggcttattctc
agtcaaccggtgacagtgcaggtggagtcgagtcatgacagcgccagcatcgaacaacac
ttttacaaggtgaaggacaacaagcagcgcctggcggcattacgcctgctgctgctccag
ttccggcccgaatcggccctggtgttctgtaacacccgtaaagagagtcaggcggtagcc
gactccctggtccaatgcggtttctccgccctggcgctgcatggcgacctggaacagcgg
gatcgggaccagatgctgatacgctttgccaatagaagcgcctctgttctggtggccacc
gatgtggcggcaagggggctggatatcgatgcgctggacctggtgatcaattatcacatt
tcccatgatgcggagagtcatctgcaccggattggccgtaccggccgggccggcagcaag
ggcatcgcctgcgcgttgtacagtgagaaggagagccatcgggtggcgcaactggaggcc
ggtattgacccgatcctggacagcgaaccgttaccaccccttgcccttctggaacaagcc
gccctgaagccggccatggccaccctgcagattgatggtggcaagaaacagaaaatccgt
ccgggcgacatcctgggcgccctcaccggtgagcgggggatcactggtcaacaggtgggc
aagatcaatatcgcggacaactgggcctttgtcgccgtgagtatctgtgcggtgaaaccg
gctctgaaaaaactgacccaagggaaacttaaaggacgctcgtttcgggttcggttactt
gaggactaa
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