Sedimenticola thiotaurini: AAY24_16870
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Entry
AAY24_16870 CDS
T03943
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds00260
Glycine, serine and threonine metabolism
seds00460
Cyanoamino acid metabolism
seds00630
Glyoxylate and dicarboxylate metabolism
seds00670
One carbon pool by folate
seds00680
Methane metabolism
seds01100
Metabolic pathways
seds01110
Biosynthesis of secondary metabolites
seds01120
Microbial metabolism in diverse environments
seds01200
Carbon metabolism
seds01230
Biosynthesis of amino acids
seds01240
Biosynthesis of cofactors
seds04981
Folate transport and metabolism
Module
seds_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AAY24_16870 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AAY24_16870 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AAY24_16870 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AAY24_16870 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AAY24_16870 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AAY24_16870 (glyA)
Enzymes [BR:
seds01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AAY24_16870 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKH21737
UniProt:
A0A0F7K1H9
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All DBs
Position
3649851..3651104
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AA seq
417 aa
AA seq
DB search
MFSKDMQISGYDDELWEAIQSEEIRQEEHIELIASENYTSPRVMQAQGSVLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRAKQLFGADYANVQPHSGSQANAAVYMALCQPGDTVLGMS
LADGGHLTHGAKPNFSGKIYNAVQYGLDPATGEIDYAQVESLAREHKPKMIVAGFSAYSR
VVDWQRFRAIADEVGAYLFVDMAHVAGLIAAGLYPSPVQIADVTTTTTHKTLRGPRGGLI
LAKANPEIEKKLNSLVFPGTQGGPLMHVIAAKAVAFKEAMEPEFKTYQQQVMTNAQAMAS
VFIERGYDVVSGGTNDHLFLVSFIQAGLTGKDVDAWLGAANITVNMNAVPNDPQSPFITS
GIRVGTPALTTRGIGEAEAKELAGWMCDVIDARGDQAAIDQVKAKVLDLCKRHPVYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtaaagatatgcagatcagtggttatgatgatgagctctgggaggcgatccaa
tcggaggagatccggcaggaggagcatattgagctgatcgcttcggaaaactacaccagc
ccacgggtgatgcaggcccagggtagcgtgctgaccaacaagtatgccgaaggctatccc
ggcaagcgctactatggcggttgcgagtttgtggatatcgccgagcaactggccatcgac
cgggccaagcagctgttcggtgccgactacgccaatgtccagccacactccggttcccag
gctaacgcagcagtctacatggccctctgtcaaccgggtgacaccgtgcttggcatgagc
ctggctgacggtggacacctgacccacggcgccaagcccaacttctccggcaaaatctat
aacgcggtccagtacggcctcgatcccgccaccggcgagatcgactacgcccaggtggaa
agtctggcccgagagcacaagccgaagatgatcgtggccggtttctccgcctactcccgg
gtggtcgactggcagcgtttccgcgccatcgccgacgaggtgggtgcctatctgtttgtc
gacatggcccacgtggccggtctgatcgccgccggtctctacccgagcccggtgcagatc
gccgatgtcaccaccacaacgacccacaagaccctgcgtggcccccgtggtggactgatc
ctggccaaggccaatcccgagatcgagaagaagctcaactcgctggtgttccccggtacc
cagggcggcccgctgatgcacgtgattgccgccaaggcagtggctttcaaagaggcgatg
gagccggagttcaagacctatcagcagcaggtgatgaccaacgcccaggccatggccagc
gtctttattgaacgcggttatgatgtggtctccggcggcactaatgaccacctgttcctg
gtcagcttcatccaggccggtctcaccggtaaggatgtggatgcctggctgggggcggcc
aacatcacggtcaacatgaacgcggtgccaaatgatccccagtcccccttcatcaccagt
ggcatccgggttggtacaccggccctgaccacccgcggtatcggtgaagcagaggcgaaa
gagctggccggctggatgtgtgatgtgatcgacgcccggggtgaccaggcggctatcgac
caggtcaaggccaaggtgctggatctgtgtaagcgccatcccgtctataagtaa
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