Sediminibacterium sp. TEGAF015: TEGAF0_02150
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Entry
TEGAF0_02150 CDS
T08564
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt03030
DNA replication
sedt03430
Mismatch repair
sedt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEGAF0_02150
03430 Mismatch repair
TEGAF0_02150
03440 Homologous recombination
TEGAF0_02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedt03032
]
TEGAF0_02150
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_02150
Enzymes [BR:
sedt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEGAF0_02150
DNA replication proteins [BR:
sedt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TEGAF0_02150
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TEGAF0_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF6240
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
BDQ10998
LinkDB
All DBs
Position
252141..253142
Genome browser
AA seq
333 aa
AA seq
DB search
MSAEKILSDWKNNSFKPVYWLEGEEAYFIDVLVDYAEKKLLSPAEAEFNLSVFYGKDADW
ADVVNACKRYPMFGDKQVVILKEAQQMKDLEKLIGYIEQPLSSTIFVVSHKEKKVDGRGK
LAAALKKTKAEVLTTKKLYDNQLPDWAGQMIKNHGLSISPKALAMLVDHIGNDLSRIENE
IEKLMLNMGTRKSIAEEDVENFIGVSKEFNAFELQAAVAQKDLAKSIRIIQYFESNPKAG
PIQLILPSIYNFFSKLYVLLALPDKNESAAAAALGVSPFFVKEYYAAARKYDFAAVEKVL
LLLHEYNLRSLGVHNGSANDAGLMKELVVKIMA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggagaaaattttatcggattggaagaataatagctttaaacctgtgtactgg
ctggagggtgaagaagcttattttattgatgttctggtagattatgccgagaaaaaattg
ttgtctccggctgaggcagaatttaatctgagtgttttctacgggaaagatgctgattgg
gcggatgttgtgaatgcctgtaagcgctatcccatgtttggagataaacaagtggttatt
ttgaaagaggcacagcagatgaaagacctggaaaagcttatcggctatattgagcaaccc
ctgtcttctacgatttttgtagtcagccataaagaaaagaaagtagatgggagggggaaa
ctggctgctgctttaaaaaagaccaaagccgaagtacttaccaccaaaaaattatacgat
aatcagcttccagattgggcgggtcagatgataaaaaatcatgggctttcaatctcgcca
aaggcattggccatgctggtagaccatattggtaacgatttgagcaggattgaaaatgaa
attgaaaagctcatgctcaatatgggcacgcgaaaatccattgcggaagaagacgtggaa
aattttattggggtgagcaaggaattcaatgcctttgaattgcaggcggcggtggcacag
aaagacctggctaaatcgattcggattattcaatattttgaatccaaccccaaagctggt
cctattcaattgatattgccctctatctataatttctttagtaaactctacgtgctcttg
gctttgccggacaagaatgagtccgctgctgcggcggcgctgggtgtttctccgtttttt
gtgaaagagtattacgccgccgcgcgcaagtatgattttgcagcagttgagaaagttctc
ttactattacacgaatacaatttacgcagcttgggcgtacacaatggttccgccaatgat
gcgggtctcatgaaagaattggtagtaaaaattatggcataa
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