Sediminibacterium sp. TEGAF015: TEGAF0_02270
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Entry
TEGAF0_02270 CDS
T08564
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sedt03009
]
TEGAF0_02270 (rimO)
Enzymes [BR:
sedt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TEGAF0_02270 (rimO)
Ribosome biogenesis [BR:
sedt03009
]
Prokaryotic type
ribosomal protein modification factors
TEGAF0_02270 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BDQ11010
LinkDB
All DBs
Position
266616..267926
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AA seq
436 aa
AA seq
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MKAKTLKKDKVNIITLGCSKNLVDSEVLSGQLAANEIDVVHENTKLDHNIVVVNTCGFID
KAKEESINTILDQVELKRRGKLDKVYVTGCLSERYRGDLEAEMPEVDAWFGTLELPLILK
QFEADYKAELLGERMLSTPKHYAYLKISEGCNRTCSFCAIPLMRGKHISRTIEDLVKEAE
TLVQKGVKEVMLIAQELTYYGLDIYKERALPKLLDALADVKGLEWIRLHYAYPSKFPLEI
LEVMQRRDNICKYLDMPLQHASNSMLKAMHRNITREEMSELIHEIRSRVPGICLRTTLIA
GFPGETEEDVEELKAFLQEHRFDRVGIFSYSHEENTSAYDLEDNVPAEVKAARAQEIMEV
QQEISYEKNQEKVGQIFKVLIDKKEAGRYLGRTEFDSVEVDNEVVIHSKKKLAIGEFVQV
KITKAYDYDLEGEVVG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaaacacttaagaaagacaaggttaatattattacactgggttgcagtaag
aacctggtagattccgaggtattgagcggtcagctggctgccaatgaaatagatgtggtg
cacgagaataccaaactggatcacaatattgtggtggtgaatacttgtggctttattgat
aaagcaaaggaagagagtatcaatactattctggatcaggtagagttaaagcgaagaggt
aagctggacaaagtgtatgttactggctgcttaagtgagcgatacagaggagacctggaa
gctgaaatgccggaagtggatgcctggtttggcactcttgaattgcctttgattttgaaa
caatttgaagccgattataaagcagaactattgggggaaagaatgttgagtacgcccaag
cattatgcctatttaaaaatttccgagggttgtaacagaacctgttcattctgtgccatt
cctttgatgcgtgggaagcatatcagccgcactattgaagatctggtaaaagaagcagaa
acgctggtacaaaaaggagtgaaggaagtcatgttgattgcgcaggagcttacttattac
ggactggatatatataaggagagggctttgcctaaattactggatgcattggctgatgta
aaaggattggagtggattcgcttacactatgcttatccaagtaagtttcctttagagatt
ctggaagtgatgcagcgacgtgacaatatttgtaagtacctcgatatgcccttacaacat
gccagcaatagtatgttgaaagcaatgcatcgtaatataacacgtgaagaaatgtcggaa
ttaattcacgaaatcagatcacgtgtaccgggcatttgtttgcgaacaactttgattgca
ggcttccccggagaaacggaagaagatgtagaggaattaaaggcgtttttgcaggaacat
cgctttgacagagtgggtattttcagctatagccatgaagaaaatacgagtgcctatgac
ctggaagacaatgtgcctgctgaagtgaaagcagcccgtgcacaggaaataatggaagtg
caacaggaaatttcttatgagaaaaatcaagagaaagtaggacagattttcaaagtgctg
atagataaaaaagaagccggtcgttatttgggaagaacagaatttgatagcgttgaagtt
gataatgaagtggtgattcatagcaagaaaaaactcgccatcggcgagttcgttcaggtt
aaaataaccaaagcttatgattacgatctggagggagaagtggtgggctaa
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