Sediminibacterium sp. TEGAF015: TEGAF0_02330
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Entry
TEGAF0_02330 CDS
T08564
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedt03016
]
TEGAF0_02330 (truB)
Enzymes [BR:
sedt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TEGAF0_02330 (truB)
Transfer RNA biogenesis [BR:
sedt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TEGAF0_02330 (truB)
Prokaryotic type
TEGAF0_02330 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Saf-Nte_pilin
Motif
Other DBs
NCBI-ProteinID:
BDQ11016
LinkDB
All DBs
Position
273984..274685
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AA seq
233 aa
AA seq
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MKQKEIHPALQPYLEGQAILIDKPIDWTSFDVVRKIRNITRIVKVGHAGTLDPLATGLLI
VCTGKYTKKINEYMGMEKEYTGTFTLGATTPTYDLESEPVNFCDTNHLSESQIKEATKKF
TGPIMQVPPIHSAIKQEGKPVYLAARKGIDVVLEPRPVTIHAFEIEKIEMPVVHFRVVCS
TGTYIRSLANDFGKALGVGAYMSSLRRTRIGHFQVSAAESMESFEAKIEQLKA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaagaaattcatcccgcattacagccttatctggaagggcaggctatttta
attgataaacccattgactggacttcatttgacgtagtcagaaaaatcagaaatattacc
cgaattgtaaaagttggacatgcaggaacccttgatccattagcgaccggccttctgatt
gtgtgtacaggaaagtataccaagaagattaatgaatatatgggaatggaaaaagagtac
acgggtacttttacattgggggctaccacacccacctatgatttagaatctgagccagtt
aatttttgtgataccaaccatctttctgaatctcaaattaaagaagcaacgaagaaattt
accggaccaattatgcaggttccccctattcattctgccatcaagcaagaggggaaaccc
gtttacctggctgcaagaaaaggcattgatgtagtgctggagcccagacctgttaccata
catgcttttgagattgaaaaaatagaaatgcccgtagttcattttcgcgtagtatgttca
acaggcacttacatcagaagtctggccaatgattttggaaaggcactgggagttggcgca
tatatgagttctctaagacgtaccagaatcggacattttcaggtatcagctgccgaatcg
atggaatccttcgaagctaaaattgagcaattgaaagcttag
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