Sediminibacterium sp. TEGAF015: TEGAF0_03280
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Entry
TEGAF0_03280 CDS
T08564
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00300
Lysine biosynthesis
sedt00470
D-Amino acid metabolism
sedt01100
Metabolic pathways
sedt01110
Biosynthesis of secondary metabolites
sedt01120
Microbial metabolism in diverse environments
sedt01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TEGAF0_03280 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TEGAF0_03280 (dapF)
Enzymes [BR:
sedt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TEGAF0_03280 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BDQ11111
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All DBs
Position
complement(374458..375258)
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AA seq
266 aa
AA seq
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MQLVFFKYQGTGNDFVILDNRNNTIQLTQSDIAFLCHRRFGIGADGLMLLNSKEGYDFEM
KYYNADGAEGSMCGNGGRCLTKFAHDAGIKKEKYIFIASDGPHDAIVTTSGWVKLKMIDV
NSFTQLPLACTINTGSPHYVQQVKNLEEMDVVADGKKIRYSSEYKEKGINVNFVEKEEDG
QLFVRTYERGVEDETYSCGTGVTAAALIMSLNNNNPYHTVKIRTKGGNLAVEFERTGTES
FQNIWLCGPAELVFKGTINVNGNSKA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagttttctttaaataccagggaacaggtaacgactttgttattctggataac
agaaacaataccattcaactcactcaatcggatattgcttttttatgccatagaagattt
ggtattggtgcagatggattaatgctgcttaacagcaaagagggctacgattttgaaatg
aaatactacaacgcagatggcgccgaaggcagcatgtgcggtaatggaggaagatgcctg
accaaattcgctcatgacgctggtatcaaaaaagaaaaatacatattcatagcttcagac
ggaccgcatgatgctattgtaaccacgagtggatgggttaaattaaaaatgatagatgtt
aacagctttactcagcttcctttagcctgcacaataaataccggatcgcctcactatgtt
cagcaagtaaaaaacctggaagaaatggacgttgtggcagatggaaaaaaaataagatac
agcagtgaatataaagagaaaggtatcaacgtcaactttgttgaaaaagaagaagatggt
caactttttgtacgaacctatgaacgtggagtggaagatgaaacttatagttgcggaaca
ggtgttaccgctgcagcactaattatgtctttgaacaacaacaatccctaccatactgtt
aagattagaacaaaaggtggaaatcttgctgtagagtttgagagaacaggaacggaaagt
tttcagaacatctggctttgcggcccggcggaattggtatttaaaggaacaatcaatgta
aacggaaattctaaagcgtaa
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