Sediminibacterium sp. TEGAF015: TEGAF0_04030
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Entry
TEGAF0_04030 CDS
T08564
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedt03016
]
TEGAF0_04030 (miaB)
Enzymes [BR:
sedt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
TEGAF0_04030 (miaB)
Transfer RNA biogenesis [BR:
sedt03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
TEGAF0_04030 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BDQ11186
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All DBs
Position
complement(450323..451750)
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AA seq
475 aa
AA seq
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MELAELMNKTHDESRQGEAFQAAESPADFQKKFYIESYGCAMNFSDSEVVAAILQENQFS
ATPQFEMADLVLINTCSIREKAEQTIRKRLTEFRKVKKTRPGMLIGVLGCMAERLKAQLL
EQEKLVDLVIGPDAYRSLPALIEEASSGQKGVNVLLSREETYGDISPVRLNSNGITAFVS
ITRGCNNMCSFCVVPFTRGRERSRSADSIIQEIQQLVDTGYKEVTLLGQNVDSYYWEDEE
KKQMVTFANLLEMAALVSPELRIRFSTSHPKDITDDVLITMAKYENICKCIHLPVQSGST
RLLQLMNRTYSREWYLAKVDRIRELLPDCGITSDMIAGFCTETEEDHKDTLSLMDYCGFD
MSYMYFYSERPGTLAARRFKDDISLEVKKRRLQEIVDKQGELSTRNNQRDIGKTFKILIE
ADSKRDSGDWTGRTSQNKITVFPKSSSLQKPGDYVWVNITDCTRATLLGKIVDHP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaactggcggaattaatgaataaaacacacgatgaatccagacagggtgaagcgttt
caggcggctgaatctcctgctgattttcaaaaaaagttttacatagaaagttatggttgt
gctatgaacttttcggatagtgaagtagtggctgccatactacaggaaaaccagttcagc
gctacccctcaatttgagatggcagacctggttttaattaatacctgctctatcagagaa
aaagcagaacaaaccatcagaaaaagacttactgaattcagaaaggtaaaaaagacccgt
ccgggcatgttgattggggtgttgggatgcatggcagaaagactgaaagctcaattactt
gaacaggaaaaactggtagatctggtaattggacccgatgcttaccgatcattgcccgct
ttaattgaagaagcgtcttcaggacaaaagggggtaaatgtattgctgagcagggaagaa
acctatggagatatttctccggttcgtttaaacagcaatggcatcaccgcatttgtatct
atcaccagaggatgtaacaatatgtgtagtttctgtgtggttccttttacccgtggaaga
gaaagaagcagatcagcagactccattattcaggagattcagcagctggtagatacagga
tataaagaagttacgcttttgggtcagaacgtagatagctactattgggaagatgaagaa
aaaaagcagatggtaacttttgccaatttgcttgaaatggctgccctggtaagccctgaa
ctgagaattcgtttcagtacttctcaccccaaagacatcacagacgatgtgctgataacc
atggcaaaatatgaaaatatttgcaagtgcattcacttacctgttcagagcggaagtact
cgactgctacagttaatgaacagaacttattccagagaatggtacctggctaaagtagac
agaattagagaacttttacccgactgtggaattacttcggacatgattgccggattttgt
actgaaacagaagaagaccacaaggatacattgagcctgatggactactgtggttttgat
atgagctatatgtacttctacagtgaaagacccggaacactggctgccagaagatttaaa
gacgatatttcgctggaagtaaaaaaaagaaggctacaggaaattgttgacaaacaaggt
gagttatctaccagaaacaatcaacgagatattggtaagacatttaagatattgattgaa
gctgactcgaaaagagactccggtgactggacaggaagaaccagtcaaaataaaataacc
gttttcccaaaatcgagcagtctgcaaaaaccgggcgattatgtttgggttaacataaca
gactgcacaagggctaccctattgggaaaaatagttgatcatccataa
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