Sediminibacterium sp. TEGAF015: TEGAF0_04150
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Entry
TEGAF0_04150 CDS
T08564
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sedt03000
]
TEGAF0_04150
03036 Chromosome and associated proteins [BR:
sedt03036
]
TEGAF0_04150
Transcription factors [BR:
sedt03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TEGAF0_04150
Chromosome and associated proteins [BR:
sedt03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
TEGAF0_04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_20
MarR
HTH_5
HTH_IclR
HTH_11
MarR_2
HTH_27
HTH_Tnp_ISL3
TrmB
LexA_DNA_bind
Staph_reg_Sar_Rot
HTH_34
NirdL-like_HTH
DUF2250
HTH_23
Rrf2
DUF4423
EAP30
HTH_Crp_2
DUF7342
HTH_PafC
HTH_Cmi2_C
GntR
Sigma70_r4
DUF7343
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BDQ11198
LinkDB
All DBs
Position
463282..463779
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AA seq
165 aa
AA seq
DB search
MPKVVKKAESTVSYSLDAKDLSILKLLQQNARATVKEIADQVHLSTTPVHERIKRMEEAG
VIKQYATLVDHTKVKKGLMVICYVSLKQHDKIAGGKFIKRIQEMHEVIECYNISGEFDFM
LKVVAESMDDYYHFHVNKLSQAENIGHVQSVFVMGVIKQTHVLVH
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagtcgttaaaaaagccgaatccactgtttcttattcattggacgccaaagac
ctgtccattcttaagttgctgcagcaaaatgcaagggcaacagttaaagaaattgcggac
caggtacatttgagtacaacacctgtacacgagcgaattaaacgaatggaagaagcaggg
gtcattaaacagtatgcaactttggtagaccataccaaagtaaaaaaaggccttatggtt
atttgctatgtgtctcttaagcaacacgataaaatagcaggaggaaaatttatcaaacgc
atccaggaaatgcatgaagtaattgaatgttacaatatatcgggtgagtttgattttatg
ttgaaagtagtggctgaaagtatggacgactattaccatttccacgtgaataagctatct
caagcagagaatataggacatgtgcaatctgtttttgtaatgggagtgattaaacaaacc
catgttttggtgcattga
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