Sediminibacterium sp. TEGAF015: TEGAF0_05280
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Entry
TEGAF0_05280 CDS
T08564
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedt03032
]
TEGAF0_05280 (gyrA)
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_05280 (gyrA)
Enzymes [BR:
sedt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TEGAF0_05280 (gyrA)
DNA replication proteins [BR:
sedt03032
]
Prokaryotic type
DNA Topoisomerases
TEGAF0_05280 (gyrA)
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TEGAF0_05280 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Oscp1
Motif
Other DBs
NCBI-ProteinID:
BDQ11311
LinkDB
All DBs
Position
593691..596381
Genome browser
AA seq
896 aa
AA seq
DB search
MEENLLPEQTNDNDRIIQVNIEEQMKTAYIDYSMSVIVGRALPDVRDGFKPVHRRVLYAM
NELGNNSNKPFKKSARIVGEVMGKYHPHGDSAIYDTLVRMAQEWTMRYTLVDRQGNFGNQ
DGDPPAAMRYTEARLQRIAEAMLDDIEKETVDFQLNFDDSLEEPTVLPTRIPQLLVNGSS
GIAVGMATNMMPHNLSEVVDGCVAYVDNRDITIEELMNYVKAPDFPTGGVIYGMEGVRQA
LMTGRGRVVVRGKCNVETKPNGREMIVITEVPYQVSRDTLTDRIGQLAINKVVEGISDVG
NQSNKDGTRIVVELKKDAVAQVVINQLYKYTELQTSYGINNVALSNGRPGIMNLRDLIKA
FIEFRMEVVIRRAKYDLRKAEERAHVLEGYLKALDHLDEVIRLIRASRTPEEAKEALMAK
SREERWYLNSAMFSELTAELYNQVEGLSEIQAKAILELRLQRLTGMERDKIIEEFNGLIA
TIKELKALLANEDLRYALIKKELLEVKEKFGDERKSEIQYLADEMRIEDLIENEDVVITI
SHLGYIKRTSATEYRQQKRGGRGAVGSKTREEDFVEHLFVASTHDTILFFTEKGRCYWMR
VYEIPEGEKQSKGRAIQNLIQLPGDDKVKAIINVKDISDTDFVQNHYIVLCTKQGIIKKT
SLEDFSRPRANGVNAITIVEGDELLEARLTNGSSEIMMAVKSGRAIRFPEEKVRATGRGA
IGVAGIEVDDSKDEVVGMICVNKDDAERTILVVSEKGFGKRTAIEDYRITNRGGKGVKTI
NVTEKTGSLVGILYVKEVEDLIITCKSGITIRTGIADIREAGRATQGVKLIRLDEGDEIA
AISQIEEQEEEEALLTDENGSTEQTDSVDNSEASSGNNKANEDAGLNSNNEEEPLN
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatttattaccggaacaaacgaacgataacgaccgcattattcaggtcaat
attgaggaacaaatgaagaccgcttacatcgactattccatgtcggtgattgttggtaga
gcattgcctgatgtaagagatggattcaagcctgtgcatcgcagagtattgtatgccatg
aatgaactgggcaataacagcaataagccttttaagaaatctgcccgtattgttggggaa
gtaatgggtaaataccatccccacggagatagtgccatctatgacacactggttcgtatg
gcccaggaatggacgatgcgttatacgttggttgatcggcagggtaactttggtaaccag
gatggagatccaccggctgccatgcgttacacggaagcaagattgcagcgcatcgcagaa
gctatgctggatgatattgaaaaagagacggtagattttcaattgaattttgacgattca
ttggaagagccaaccgttttgccgactcgcattccacagttgctggtaaacggctcctcc
ggtattgccgtgggtatggccaccaatatgatgccccacaacttgagcgaagtagtagat
ggctgtgttgcttatgttgacaacagagatatcactattgaagaattgatgaattatgta
aaagcgcctgatttccctaccggtggtgttatttatggtatggagggagttagacaggcg
ctcatgacgggaagaggccgtgtagtggtgcgcggtaaatgcaacgtggaaaccaagccg
aatggccgtgaaatgattgtgattaccgaagtgccttatcaggtaagccgtgatacctta
acagaccgtattggacagttggccatcaataaagttgtggaaggaatttccgatgtaggt
aaccagagtaataaagatggtacccgcattgttgtagaattgaagaaggatgctgttgca
caagtagtcattaatcagttgtataagtacacggaattgcagaccagctatggtatcaat
aacgtagcccttagcaatggccgcccgggtattatgaatcttcgcgacctgattaaagct
ttcattgaattcagaatggaagtggtgattcgtcgtgccaaatacgatttaagaaaagca
gaggaaagagcacatgtgttggaaggatacttgaaagcacttgatcatttagacgaagtg
attcgtttgattcgcgccagccgtactccggaagaagcaaaagaagcgctgatggcaaag
agccgcgaagaacgctggtatttgaactctgctatgttctctgagctaactgcggaattg
tataaccaggtagagggattgtctgaaattcaggcgaaagctatactggaattacgttta
cagcgattaaccggtatggagcgcgataaaatcattgaagaattcaatggcctgattgca
accattaaagagttaaaagccttgctagcgaatgaagatcttcgttatgcgttaatcaaa
aaagagttgttagaagttaaagaaaagtttggtgatgaacgtaaaagcgagattcaatat
ttagcagatgaaatgcgtattgaagacctgattgaaaatgaagatgtggtgattaccatt
tctcatttaggatatattaagcgtacttctgctaccgaatatcgtcagcagaaaagaggg
ggaagaggtgcggtaggatcgaagacgcgtgaagaagattttgttgaacatttatttgtg
gcttctacacacgataccattttattcttcacagagaaaggaagatgctattggatgcgc
gtgtatgaaattccggaaggagagaagcaaagcaaaggtagagccattcagaatttgata
caattgcccggggatgataaagtaaaagctatcatcaatgtgaaggatatttctgataca
gactttgtacaaaatcactatatcgtattatgtaccaaacaaggtattattaagaaaaca
tccttagaagatttcagcagacctagagccaatggtgtaaatgccattacgattgtggaa
ggcgatgagctcttagaagctagacttaccaacggctccagcgaaataatgatggcggta
aagagtggaagagccattcgtttccccgaagaaaaagtaagagccacaggaagaggagct
attggggttgccggtattgaggtagatgattccaaagacgaagtggttggcatgatttgt
gtaaacaaggatgatgctgaaagaactatcttggtggtaagtgaaaaaggatttggaaag
agaacagccattgaagactatagaattaccaatcgtggcggaaaaggggtaaagaccata
aatgttaccgaaaaaacaggtagcctggtaggtatactatatgtgaaagaggttgaagat
ttaatcatcacttgtaagtctggtattaccattagaaccggtattgcagatatcagagaa
gcgggaagggccacacagggtgtgaaactcattcgtttggatgagggagatgaaattgca
gctatttctcagattgaagaacaggaagaggaagaagcgctgttgacagatgaaaatggt
tcaacagaacaaaccgattctgttgataacagcgaagcatcatctggtaacaataaagcc
aatgaagatgctggattgaatagtaataatgaagaagaacctttaaattaa
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