Sediminibacterium sp. TEGAF015: TEGAF0_05370
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Entry
TEGAF0_05370 CDS
T08564
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TEGAF0_05370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedt02000
]
TEGAF0_05370
Transporters [BR:
sedt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TEGAF0_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
nSTAND3
DUF87
G-alpha
AAA_16
DEAD
AAA_29
SMC_N
AAA_18
AAA_5
AAA_22
AAA_7
AAA_15
ATPase_2
ATP-synt_ab
ATPase
Sigma54_activat
YWFCY
DUF815
FtsK_SpoIIIE
DUF4014
NACHT
Zeta_toxin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BDQ11320
LinkDB
All DBs
Position
complement(606815..608653)
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AA seq
612 aa
AA seq
DB search
MKELASLNHYFWKYRKRFFIGIFFVITSNYFAVLAPQITGYVISLVQQKLPGAKPASVYH
AEGDIVNRFIALVSNKDWSFGWLIAFCSLSILGIAIIRGVLMFFMRQTIIVMSRHIEFDQ
KNEVYQQYQRLHTAFYKQNSTGDLMNRIAEDVSRVRMYTGPAVMYLINLVTLIGFCLVNM
LSKDVNLTLLVLAPLPLLAITIYKVNSIINKKSESIQEDLSNLTTNAQESYSGIRVIKSF
VQEKAMFGFFNQNSEKYKQNAIGLARVEALYFPSMALMIGISTLITIFLGGMQAMQDPSK
VGTIVEFVIYINMLTFPVSAIGWTASMIQRAAASQKRLNEFLQLEPAIKDHPTVLPDEMV
SGTIEFKQVDFTYPDTGIKAIQQLSLQINRGEKILVLGKTGSGKSTLAQLLLRFYEPDKG
SITVGSKPLHMYSLEKLRKNISYVQQDIFLFSDTVANNIRFGVSPDTPIERVEEAAKSAS
IHNEIMGFENGYETMIGERGVTLSGGQKQRISIARALIKNPEIIVFDDCLSAVDAKTEKH
IIGHLYNYLQDKTAIIITHRIFSGFHFDQIIVLEDGKMAEKGTHDQLMQLNGYYAELYRM
QLEASVQQSADI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaattagcctcattaaatcattatttctggaagtatagaaagcgtttctttatt
gggatattctttgtaattacgtccaattattttgcagttttagcgccacaaatcaccggt
tacgtaatcagtcttgtacaacaaaagcttcccggcgccaagccagcttctgtttaccac
gctgagggagacattgtgaaccgtttcattgccctggttagtaataaggactggagtttt
ggctggctgattgccttttgcagtctgagtattctgggaatagccatcattagaggggtt
ctaatgttttttatgcgtcagaccatcattgtcatgagcagacatatagaatttgaccag
aaaaatgaagtttatcagcaataccaacgtttacatactgcattttacaaacaaaacagc
acaggggatttaatgaacagaattgccgaagacgtaagcagggtaaggatgtacactgga
ccggctgttatgtacctgatcaatctggttacattaattggattttgtctcgttaatatg
ttaagtaaagatgtaaaccttactttactcgttctggccccgcttcctttactagccatt
accatatacaaagtcaatagtatcattaataaaaagagtgaatccattcaggaagatctt
tccaatttaaccaccaatgcccaggaatcttattccggcatcagagttataaagtctttt
gttcaggaaaaagccatgttcggtttctttaatcaaaacagcgaaaaatacaagcagaat
gcaattgggcttgccagagtagaagccctgtattttcctagtatggcattgatgattggc
atcagtacattaattaccatttttctgggtggaatgcaagccatgcaggacccttcaaaa
gtgggtaccattgttgagtttgtgatatacatcaatatgctgacatttccggttagtgcc
atcggttggacagcaagtatgatacaacgggctgctgcttcacaaaaaagactgaatgaa
tttttgcaacttgagccagccattaaggatcatccaaccgttttgcctgatgaaatggta
tcagggaccattgaatttaaacaagtagattttacctatcctgatacaggaattaaagcc
attcagcagttaagtttacaaattaaccggggcgaaaaaatcctggtattaggaaaaacg
ggaagtggaaaatctacgcttgcacaattgttattgcgattttatgagcctgataaagga
agtattacagtgggatcaaaaccgctgcatatgtacagtttagaaaaacttcgcaagaat
atcagctatgtacaacaggacatatttttattcagtgatactgtggccaataatatccgt
tttggagtttctccggatacacccattgaaagggtagaagaagccgccaaaagtgctagc
atccacaatgaaatcatgggctttgaaaacggatatgaaaccatgataggagagcgcgga
gtaacactaagcggaggccagaagcaaagaatttctattgccagggctttgattaaaaat
ccggaaatcattgtgttcgacgactgcttaagtgctgttgatgccaaaacagagaaacat
attattggccatttgtacaattacttacaagacaaaacagccatcataattacacatcgt
attttttctggttttcattttgaccagatcattgtacttgaagacggaaaaatggcagag
aagggtacccatgatcaattaatgcaattgaacggttactatgcagaactatacagaatg
cagctggaagcttctgtacagcaaagtgcagacatttag
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