Sediminibacterium sp. TEGAF015: TEGAF0_05860
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Entry
TEGAF0_05860 CDS
T08564
Symbol
ung2
Name
(GenBank) uracil-DNA glycosylase 2
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TEGAF0_05860 (ung2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_05860 (ung2)
Enzymes [BR:
sedt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TEGAF0_05860 (ung2)
DNA repair and recombination proteins [BR:
sedt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TEGAF0_05860 (ung2)
Prokaryotic type
TEGAF0_05860 (ung2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDQ11369
LinkDB
All DBs
Position
662157..662831
Genome browser
AA seq
224 aa
AA seq
DB search
MNVQMEEGWKELLSKEFEKPFFQKLALHLRTEKATKAVIYPPGPLIFNAFNSTPFQTLKV
VILGQDPYHGPGQAHGLSFSVPEGVKPPPSLLNIFKELHQDIGMPMPSTGNLSAWAKQGV
LLLNAVLTVRANEPASHAKIGWMDFTDAVIRKISSEKQGVIFLLWGKFAQEKQALIDETK
NYVLKAAHPSPFSADKGFFGCKHFSKTNELLVQQGLDPIDWQLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcaaatggaagaaggctggaaagaattgctctccaaagagtttgaaaaacct
ttctttcagaagttagcacttcatttgcgaacagagaaagccacaaaagctgttatttac
cctcccgggcctttgatattcaacgcttttaacagcaccccctttcaaactttgaaagta
gttatcctggggcaggatccctatcatgggccaggtcaagcacatggtttaagtttttcg
gtaccagagggagtaaaaccgccgccttcactgttaaatatattcaaagagttgcaccag
gatatcggaatgccaatgcccagtacagggaaccttagtgcctgggctaaacagggtgtt
ctacttttaaatgccgttttaacggttagggccaatgaaccggccagccatgctaaaatt
ggatggatggattttactgatgcagtaataaggaaaatctcatctgaaaaacagggggtg
atatttttactttggggaaagtttgcacaggaaaaacaggcactgatagatgaaacaaaa
aattacgtactgaaagcagcccacccctctccgtttagtgcagataaagggttctttgga
tgtaaacattttagtaagaccaatgaactgctggttcagcagggattggatcccattgac
tggcaattgccttaa
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