Sediminibacterium sp. TEGAF015: TEGAF0_06000
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Entry
TEGAF0_06000 CDS
T08564
Symbol
sirR
Name
(GenBank) iron-dependent repressor
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sedt03000
]
TEGAF0_06000 (sirR)
Transcription factors [BR:
sedt03000
]
Prokaryotic type
Helix-turn-helix
Other families
TEGAF0_06000 (sirR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
Rio2_N
SgrR_N
Rrf2
MarR_2
PglZ_C
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
BDQ11383
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All DBs
Position
complement(682170..682841)
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AA seq
223 aa
AA seq
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MPLTSSEENYIKTIFQLQVKDGLVSTNEVATVLQTSAASVTDMLKKLKSKKLLVYEKYKG
FKLNNDGKKIALMVLRKHRLWETFLVKVLKFNWDEVHEVAEQLEHIQSQQLIDHLNDFLG
NPAFDPHGDPIPDATGKMPFQSQMNLNKFPLYMSGEVTAVGSQSADILSLLQHKKIAIGV
RIKVKQNFAFDNSFEIQINDKELVHISAQLAEQIYVKKLQHAN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaacttcttctgaagaaaattatatcaagaccatttttcaacttcaggttaaa
gacgggttagttagtaccaacgaggtagcaacagttttacagacttcagctgcttctgtt
acagatatgcttaaaaaactaaagagcaaaaaattactggtatatgaaaaatacaaaggc
tttaaattaaataatgatggtaagaaaattgccttaatggttttgcggaaacaccggctt
tgggaaacattcttagtgaaagtattgaagttcaattgggatgaagtgcatgaagtagca
gagcaactggaacatattcagagtcaacagctcattgatcacttgaatgattttttaggt
aatcctgcatttgatccgcatggagaccctattcctgatgcgactggtaagatgccattc
caatctcaaatgaatctgaataaatttcctctgtatatgtcgggcgaggtaactgcagtt
ggcagtcagtctgctgatattctttctctacttcaacacaaaaaaatagctattggagtc
aggataaaagtgaagcaaaattttgcatttgataactcttttgaaattcaaataaacgat
aaagagcttgttcatatcagtgcgcaattggctgaacagatttatgtaaaaaaattacag
catgcgaattag
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