Sediminibacterium sp. TEGAF015: TEGAF0_06830
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Entry
TEGAF0_06830 CDS
T08564
Symbol
gcdH
Name
(GenBank) acyl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00071
Fatty acid degradation
sedt00310
Lysine degradation
sedt00362
Benzoate degradation
sedt00380
Tryptophan metabolism
sedt01100
Metabolic pathways
sedt01110
Biosynthesis of secondary metabolites
sedt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
TEGAF0_06830 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
TEGAF0_06830 (gcdH)
00380 Tryptophan metabolism
TEGAF0_06830 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TEGAF0_06830 (gcdH)
Enzymes [BR:
sedt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
TEGAF0_06830 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
BDQ11466
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Position
complement(771542..772726)
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AA seq
394 aa
AA seq
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MAARTDLFQSPDYYQLDELLSEEHKLIRDTVRAYVKKDISPIIEEYAQRAAFPEQIVAQL
GELGCFGPTVPTQYGGGGLDYISYGLMMQELERGDSGVRSTASVQGSLVMYPIYAYGNEA
QRNKYLPKLASGEWLGCFGLTEPDHGSNPAGMTTNIKDAGDHVILNGAKMWISNAPYATV
AVVWARNEQNEIQGVIVERGMEGFSTPTTHGKWSLRASATGELVFDNVKVPKENILPNVK
GLKGPLGCLTKARYGIAWGALGAAMDCYDTALRYSMERQQFDRPIGGFQLQQKKLAEMIT
EITKAQLLVWRLGVLMNEGKATPQQVSMAKRNSCEIATNIARDARQMLGGMGITGEYSIM
RHMMNLESVITYEGTHDIHLLITGMDVTGYNAFK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaacagatttgtttcaatcccctgattattaccagttagatgaattgtta
agtgaagaacacaaactaatcagagacacggtaagagcatatgtaaagaaagatatttcg
ccaatcatagaagagtatgcacagcgtgcagcttttccagagcaaattgtagcacaatta
ggggaattgggttgttttggcccaacagttccaacgcaatatggtggaggcggtctggat
tatattagttacggattaatgatgcaggaattagagagaggagatagcggtgttagaagc
acggcatctgttcagggaagtctagtaatgtatccgatttatgcttatggtaatgaagca
caaagaaataagtatctgccaaaattggcatcaggggaatggttgggttgttttggatta
accgagcccgatcatggtagtaaccctgcaggtatgactaccaatattaaagacgctgga
gatcatgttattctgaacggagccaaaatgtggatcagtaatgctccttatgcaacagtg
gctgttgtttgggcaagaaatgagcaaaatgaaatccagggagtaatagtagaaagaggc
atggaaggattttctacgccaaccactcatggcaaatggagtttgagagccagtgcaacc
ggcgaattggtatttgataatgtaaaagttcccaaagaaaatattttaccgaatgtaaaa
ggattaaaaggccctctgggatgtttaaccaaagccagatatggtattgcctggggagca
ttgggcgctgcaatggattgttatgacactgcattgcgttatagcatggaacgtcagcag
tttgacagacctattggaggatttcaattgcagcaaaagaaactagctgaaatgatcaca
gaaattactaaagcgcagttgctggtttggagacttggggtattgatgaatgaaggcaaa
gctactccacaacaagtaagtatggctaaaagaaatagttgcgaaattgcaaccaatatc
gctagagatgcccgtcaaatgctaggtggtatgggaattaccggcgagtatagcattatg
cgtcatatgatgaatctggaaagtgtaattacttatgaaggaacacacgatattcatttg
ctaattacaggtatggatgtaacaggatataacgccttcaaataa
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