Sediminibacterium sp. TEGAF015: TEGAF0_07320
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Entry
TEGAF0_07320 CDS
T08564
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt03030
DNA replication
sedt03430
Mismatch repair
sedt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEGAF0_07320
03430 Mismatch repair
TEGAF0_07320
03440 Homologous recombination
TEGAF0_07320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedt03032
]
TEGAF0_07320
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_07320
Enzymes [BR:
sedt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEGAF0_07320
DNA replication proteins [BR:
sedt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TEGAF0_07320
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TEGAF0_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
DUF3231
RRM_DME
Motif
Other DBs
NCBI-ProteinID:
BDQ11515
LinkDB
All DBs
Position
complement(832489..833256)
Genome browser
AA seq
255 aa
AA seq
DB search
MKLNLTRPIAFIDLETTGVNVSTDRIVEIAIVKILTDGTKQVKRKLINPQIPIPAGASDV
HGITDEMVKDAPSFKQVANEVKQFIENCDLGGYNSNRFDIPMLIEEFLRAGVPFSADGRK
LVDVQKVFHMMEQRTLGAAYKFYCNKVLEDAHSAEADATATWEVLEAQIERYPQIGNTVE
SIVKFTGEDDIVDFARRFVKENGVEVFNFGKHKGKPVVQVLKEEPQYYDWMMKGDFAMNT
KQKLTEILNRTLLKK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttaaccagacctatcgcttttattgatcttgaaacaaccggtgtaaat
gttagcactgaccgaattgttgaaattgccattgtgaaaattttgacagatggaaccaaa
caagtaaagcgtaaactgattaatccacagataccaatccccgcaggagcctcagatgtt
catggtataacagatgaaatggtaaaagatgcgcctagctttaaacaagtagccaatgaa
gtaaagcagtttattgaaaattgtgatttaggagggtataacagcaatcgctttgatatc
ccgatgctgatagaagaatttttaagagccggagttcctttttctgcagatggcagaaag
ctggttgatgttcagaaagtctttcatatgatggaacaaagaacattgggggcagcgtat
aaattttattgcaataaagtgctggaagatgcccatagtgcggaagcagatgcaactgca
acctgggaggtactggaggcgcagattgaacgatatcctcagattggtaatacggtagaa
agtatagtgaagtttactggggaagatgatattgtagactttgcaagaagatttgtaaaa
gagaatggagtagaagtatttaatttcggcaaacataagggtaagcccgttgttcaggta
ttaaaagaagagcctcagtattatgactggatgatgaaaggcgactttgccatgaacact
aaacagaagttaacagaaatattaaacagaaccctgcttaaaaaataa
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