Sediminibacterium sp. TEGAF015: TEGAF0_07920
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Entry
TEGAF0_07920 CDS
T08564
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sedt03110
]
TEGAF0_07920 (clpB)
Chaperones and folding catalysts [BR:
sedt03110
]
Heat shock proteins
HSP100
TEGAF0_07920 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_7
IstB_IS21
RsgA_GTPase
NACHT
Roc
Zeta_toxin
AAA_3
AAA_28
AAA_18
AAA_24
NBD_SMAX1
Torsin
KIF9
Motif
Other DBs
NCBI-ProteinID:
BDQ11575
LinkDB
All DBs
Position
complement(903294..905888)
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AA seq
864 aa
AA seq
DB search
MNLNNYTIKAQEAIQSAQQVAYNNGNPSIETDHLLKALLTDKDSAIEFLLKKNNVNPVFL
ETKLAEQLNKLPKVQGGEPAQNAGRDFSNALLKATTVMSSFKDEFVTPEHLLLALVQMSD
ATGTLLKAAGLTEKGLTTAIKDLRKGDTIRSQAQETQLNMLNKYAKNLNDMARQGKLDPV
IGRDEEIRRTLHILTRRSKNNPILVGEPGVGKTAIVEGLAMRIVNGDVPENLKSKIIYGL
DMGQLIAGAKYKGEFEERLKGVVKEVTSSDGEIILFIDEIHTLVGAGGGEGAMDAANILK
PALARGELRAIGATTLNEYQKYFEKDKALERRFQKVMIDEPSVEDAISILRGLKDRYETH
HHVRIKDEAIIAAVELSNRYVTDRFLPDKAIDLIDESAAKLRLEMNSMPEELDKLERQIR
QLEIEREAIKREDDEDKLKELNIEISNLAVERDTLKAKWTQEKELVEKVQSAKARIEQLK
QEAEQAERNGEYGKVAEIRYGKVKEQETLIASVTEQLMQTSEKRLLKEEVDAEDIAESIA
KATGIPVAKMLQGEREKLLHLEEELHSRVVGQEEAIAAVSDAIRRSRAGLQDPKKPIGSF
IFLGTSGVGKTELAKALAEYLFDDETMMTRIDMSEYQEKHTVSRLIGAPPGYVGYDEGGQ
LTEAVRRKPYSVILLDEIEKAHPDVWNVMLQVLDDGRLTDNKGRMVNFKNTIIIMTSNIG
SHLIQEAFEGVEENGLEDAAEKAKTEVMQLLKQTVRPEFLNRVDEIIMFSPLNKKQLKGI
ITIQLESLKKLVAENDIQLRFSDYLVEYLMENGFDAQLGARPLKRLIQKLIVNALSKKIL
SGDIDKNQPVLVDVFDGVVVFRNE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaacaattataccattaaagcgcaggaagcaattcagtctgcgcagcaggtt
gcctataacaatggaaatccatccattgaaacggatcacttgctgaaggctttattaact
gacaaggattcagcaattgaatttttgttaaagaagaacaatgtgaatcctgtttttctg
gaaaccaaacttgccgagcaactgaataagttgccaaaggtacagggaggagaacctgct
cagaatgccggacgtgatttcagtaatgctttgctgaaagcaactaccgtaatgagttcc
tttaaagatgaattcgttacccctgaacatctcttgcttgctttggtgcaaatgagtgat
gctaccggaactttattaaaagctgcaggtttaacagagaagggattaaccactgccatt
aaagatttacgaaaaggagataccattcgttcgcaggcacaggaaacgcagctaaatatg
ctgaataaatatgccaagaacctgaacgatatggccagacaaggcaagctggatccggtg
attggccgtgacgaagaaatcagaagaaccctgcatatacttacccgcagatctaaaaac
aatcccattttagtgggtgaacccggtgttggtaaaacagctattgtagagggactggct
atgcggattgtaaatggagacgtacctgaaaatctgaaaagcaaaattatttatggatta
gacatggggcaactgattgccggtgctaagtataagggggaatttgaagagagactaaaa
ggtgtggtaaaagaagtgacttccagtgatggagaaattattttattcatcgatgaaatt
catacattagtaggtgcaggtggtggcgaaggagctatggatgcggccaatatattaaag
cctgcattggcacgcggagagttaagagccattggtgcaaccacattaaacgaataccag
aaatattttgaaaaggacaaggcactggaaagaagatttcagaaagtaatgattgatgag
ccttcagtagaagatgccatttcaattttgcgtggtttgaaagatcggtacgaaacgcat
caccatgttcgtattaaagatgaagctattattgctgcagtagaattatccaatcgttat
gttacggatcgtttcttgcccgataaagccattgacttaatagacgagagtgcagccaag
ctgagactcgaaatgaattctatgccagaagagctggataaactggaacgtcagattcgt
cagttggaaattgagcgcgaagccattaagcgggaagacgatgaagacaaactaaaagaa
ctcaatattgaaatcagtaaccttgctgtagagcgcgatacgctgaaagcgaagtggact
caggagaaagaactggtggagaaagtacagtctgccaaagcgaggattgaacaattgaag
caagaagccgagcaggcagagcgtaatggcgaatatggaaaagtagctgaaattagatac
ggtaaagtaaaagaacaggaaacccttatagcttccgttaccgaacagttgatgcagact
tcggagaaaaggttattgaaagaagaagtggatgcagaagatatagcagaaagtattgcc
aaggcaacgggtattccggtagccaaaatgctgcaaggggagagagaaaaattattgcat
ttggaagaagaactgcatagcagggttgtaggacaggaagaagccattgctgcggtttct
gatgccatcagaagaagcagggctggattgcaagatcctaagaagccaattggatccttt
attttcttaggcacttctggtgtaggtaaaacagaactggcgaaagccctggcagaatac
ctgtttgatgatgagactatgatgacccgtatagacatgagtgaatatcaggaaaagcat
acggtttcccgattgattggcgcacctcccggatatgtagggtatgatgaaggcgggcaa
ttaacagaagctgtgcgcagaaaaccttatagtgtaattctcctggatgaaattgaaaaa
gcacatcctgacgtttggaatgtgatgttacaggtattagacgatggcagactaacagat
aacaaaggcagaatggtgaattttaaaaatacgatcatcattatgaccagcaatattggt
agccatttaattcaggaagcgtttgaaggggtagaagaaaacggactggaagatgctgct
gaaaaagctaagacagaagtaatgcaattgctaaagcaaacagtaagacctgagtttcta
aacagggtagatgaaattatcatgtttagtccgttgaataagaaacagctgaagggtatc
ataactatccagttggaatccttgaaaaaactggttgccgaaaacgatattcaattacgc
tttagtgattatctggttgaatacctaatggaaaacggatttgatgcacagttgggggca
agacctttgaagcgattaattcagaagttaattgtaaatgcattgagtaagaaaattctt
tccggagatattgataaaaaccaaccggtactggtggatgtatttgatggtgtagtggtt
ttcagaaacgaataa
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