Sediminibacterium sp. TEGAF015: TEGAF0_09600
Help
Entry
TEGAF0_09600 CDS
T08564
Symbol
rfaF
Name
(GenBank) ADP-heptosyltransferase
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00540
Lipopolysaccharide biosynthesis
sedt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TEGAF0_09600 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sedt01005
]
TEGAF0_09600 (rfaF)
Enzymes [BR:
sedt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
TEGAF0_09600 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
sedt01005
]
Core region
TEGAF0_09600 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BDQ11743
LinkDB
All DBs
Position
complement(1097489..1098496)
Genome browser
AA seq
335 aa
AA seq
DB search
MQKLLIIQTAFIGDVVLATGLLESLHEAYPQAQIDVLVRNGNESLFANHPFVHRVLVWQK
KQHKYLNLMKLAFSVRKASYDIVFNLQRYAATGWITCFSGAREKIGFNKNPFRFCYSRTL
VHSMDTNKGIHEINRNFQLIAHINGVRLKNPVLYPAVSDIEKVLPYQQLPYICIAPSSVW
ATKQFPKEKWIAFLNALPKELKVYVLGGPGDISLCNEIIEASSTENAINLAGKLNFLASA
ALMKNALMNYVNDSAPMHFCSSVDAPVTAIYCSTVPGFGYGPLSMHSNIVEVKQALDCRP
CGLHGKTACPLGHFNCGFQIEIAQLIATLPALTKQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattgctgattattcaaaccgcatttattggggacgtagtactggcaactggt
ttactggaatcactgcacgaagcttatcctcaggctcagatagatgtattggtaagaaac
ggcaatgagtctttgtttgcgaaccatccctttgttcatcgggtcctggtctggcaaaaa
aaacagcataaatacctgaatctgatgaaactggcattcagtgtcagaaaagcatcttat
gatatcgtcttcaatttgcaacgctacgctgcaactggctggattacctgtttttcaggt
gcaagagaaaaaatcgggttcaataaaaatccctttcgtttttgttactcgcgaacgctt
gtgcatagtatggacaccaacaaggggatacacgaaatcaatagaaattttcaattgatt
gctcatataaatggtgttcggctgaaaaatcccgttttgtatcctgctgtttccgatata
gaaaaagtgcttccctatcagcagctaccttatatctgcattgccccttcttcagtatgg
gcaacaaagcagtttcccaaggaaaaatggattgcgtttttgaatgcccttcctaaagag
ctcaaagtgtatgtattaggcggacccggggatatttcgctttgtaatgaaattattgaa
gcaagcagtacagaaaatgccattaatcttgcaggcaaacttaattttctggcttcggct
gcactaatgaaaaatgctttgatgaactatgtaaatgattctgcccccatgcatttctgt
tcctctgtagatgcgccggttaccgccatctactgttctacggttccaggattcggatat
ggacctttgagcatgcatagtaatattgtagaagtgaagcaagcattggattgcaggcct
tgcggattgcacggtaaaactgcctgtcctcttgggcattttaattgtggatttcaaatt
gaaatagcacaattaattgccacgcttcctgccctgaccaaacaatag
DBGET
integrated database retrieval system
