Sediminibacterium sp. TEGAF015: TEGAF0_11880
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Entry
TEGAF0_11880 CDS
T08564
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_11880
Enzymes [BR:
sedt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
TEGAF0_11880
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
TEGAF0_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BDQ11971
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All DBs
Position
1338475..1339977
Genome browser
AA seq
500 aa
AA seq
DB search
MKTVTLVFPHQLFKESEALFEKKPVYLIEEWLFFRQYSFHYQKLLLHRASMKAYESYLKA
AGHSVQYIDSQNPLSNILELIPYLKQKGIRQIQLADPADNWLSRRITKACSAHQIELQIF
DNPGFLNSLENCSAFFDKKKTFFQTDFYTWQRKQRNILVNDKGQPLGGKWTFDADNREKY
PKNAVPPSFNMAKENAFISEAKEYIKTYFSTNPGVKEAPFGNSSSQQYYPIDFHSAEAWF
EQFLQKRFHDFGKYEDAMVSGESVLHHSLLSPLMNIGLLTPEWIIRRTLEYSSEQDIPMN
SLEGFLRQIIGWREFIYQVYGRIGSKQRTKNYWGFSRKIPDSFYTGETGIVPVDEAIQKL
KKTGYNHHIERLMILGNFMLLCEFDPDEVYRWFMEMYVDAYDWVMVPNVYGMTQFADGGM
MTTKPYISGSNYILKMSNYPKGKWQEIWDALFWRFMHVHRSFFLKNPRLGMLIKTFDKMP
DQKRQSHLQIAEDYLKKISQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagttaccctggtcttcccgcaccagctttttaaggagagcgaagcattattt
gaaaaaaaacctgtctacctcattgaagaatggttgttttttaggcaatattcatttcat
taccagaaacttttattgcaccgcgccagcatgaaagcctatgaatcttatttgaaggca
gcgggccattctgttcaatatatagattcgcagaacccactttccaatattcttgagcta
attccctatctgaaacaaaaaggcataagacaaattcaactagcagatcctgcagacaat
tggttatcgagaagaatcacaaaagcttgttcagcccatcaaattgaacttcaaattttt
gataaccctggttttttaaactcactggaaaactgttcagctttttttgacaaaaagaaa
acattttttcaaacggatttttatacatggcaaagaaaacaaagaaatattctggtaaat
gacaagggacaacccttgggaggtaaatggacttttgatgctgataacagagaaaaatat
cccaaaaatgcagtcccaccatcttttaatatggcaaaggaaaatgcctttatttcagag
gcaaaagaatacataaaaacatacttctctacaaaccctggggttaaggaagcgccgttc
ggaaattcatctagccaacaatactatccaatagactttcattctgcagaagcatggttt
gaacagtttcttcaaaaacgcttccatgattttggaaaatatgaagatgcaatggtatca
ggtgagtccgtattacaccatagccttttaagtcccctgatgaatattggcttactcacc
ccagaatggattatcagaagaacgcttgaatatagcagtgaacaggatattccaatgaat
tcgttggaaggtttccttcgtcagattattggatggagagaatttatataccaagtatat
ggcagaatcggttccaaacaaaggactaagaattactggggattcagtagaaaaattcct
gactcattttatacaggagaaactggcattgtaccagtagatgaagcaatacaaaaacta
aaaaaaaccggctataaccatcatattgaaaggctgatgattttaggcaatttcatgctg
ttatgtgaatttgatccggatgaagtttacagatggtttatggaaatgtatgtggatgca
tatgattgggtgatggtgccaaatgtgtatggtatgacgcaatttgcagacggcgggatg
atgactacaaaaccatatatcagcggcagtaattatattctgaaaatgagtaattaccct
aaaggtaaatggcaggaaatatgggatgcgctgttctggcgatttatgcatgtacacaga
tcatttttcttaaagaatccgagactaggtatgcttatcaaaacattcgataaaatgccg
gatcaaaaaaggcagtctcatttacaaattgcagaagactatttaaaaaagatttcacaa
tga
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