Sediminibacterium sp. TEGAF015: TEGAF0_13390
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Entry
TEGAF0_13390 CDS
T08564
Name
(GenBank) hypothetical protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
TEGAF0_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
Motif
Other DBs
NCBI-ProteinID:
BDQ12122
LinkDB
All DBs
Position
complement(1489420..1495443)
Genome browser
AA seq
2007 aa
AA seq
DB search
MKDPIGSFETIKENFIRYVKTAFGTKFEGVEKERYDLLNYDKVLYRKPWIEPLPDYVSSG
KKINDLTAEDLGNALNEGEVETFKGLVNTGLVGNFPLHSHQAEMLKQALLGNNCIITSGT
GSGKTESFLLPLFAQLSKELANWTAPNQQSTNLNSWWRENGGLSARQIVNNSNFTLSNDV
RQRNHETRKAGVRALILYPMNALVEDQMSRLRKALDSDDTRNWLSENTNGNKIYFGRYNG
SSPVAGELKKIKDDGTFAINTNKVNQLKEQLQQIETDSNRVAQYIQQTGKTGNDAKDLKS
FFQHLDGAEMRSRFDMQVAPPDIMITNYSMLSIMLMRDIDKGIFNETKQWLEESEKNIFH
LIIDELHLYRGTQGTEVAYLLKLVLNRLGLDPNHPQLRILASSASLEAKEETKEGQESKQ
FLKDFFGTEKPFKIIEGKNNPITAFPENEKKIPINPFKEIAKIFSEVKGNITDVNFISTC
EASATQLATAFNLSQDGNGISKLISVIINPSFQLKERLFSPCQDYKAVCSTQATGDDDNG
KYFAETIFERTSNKEDLEKALRGLLIVRAMLDEKEFEDIAKTIPDDRKLPRFRFHYFFRN
IEGIWASVKPDEIDQKYSDGGRTVGKLYSTTRINSEKGNRVLELLYCDNCGTTLFGGSRL
VTRNESGNNSFEMLPISPNIEGIPEKTPAKLVERRSYQEYAVFWACGNQQYTPHDAEAGI
PQVGWRQPTLNGFNQTDFLADWIPASLNCISGDIDNSHNKADEKPEQWIKGYYFIITNNS
NRDIALPDANGNISEIETHKALPSVCPSCGVNHQKRRQDWNKNKTSSIRGFRTGFAKTTQ
MFAKELMYQLPNSEAERKLVVFSDSREDAAQIANGIERNHFSDLMREVLVKELHSNLMFR
FQIVDAFDKGNTKRKQELKEQSQTIFDEIEFLVENSAYTGTNASRIREKQKAEIKLNEIR
SLTLNVRSLVHITNSLNLAPLIKHFVGLGINPGGNDIALQTRLLNNNFVPWYDLIDFTNF
QWAAGANQDYIDALKEGSFDGLATIFFGSLFYSFESSALGYVCINPELQVITDQARTVAL
AKDDFLQIVNSSIRILGDKYKHNKVEDASPFNFTQYNDFPGQVKKYIRAVETRYSKNQNE
IGDAVFNTLSTSSLLRGDTGIQIENLFIKVARSTDSIWTSQRGSRPHLHFSGGICTHSVT
ALQQQPDRICDDVWKENYLSYNAIKQQREPIRLHCEELTGQTDDQFERQRHFRNIILPDE
GNKQVKTIDLLSVTTTLEVGVDIGALQAVMLGNMPPQRFNYQQRVGRAGRRGQAYSVILT
FCRGRSHDEFYFANPQKITGDAPPTPFLTMGQERIFKRLLAKEIFRKAYVEKEINITSDD
KSSVHGEFGSVDSWTIYKPEISNWINENRTVIEQTVDALLTPQLKDKKDEFVNWVADTTT
PNGLIEKAESIINNEEIASNDISEKFAEGGILPMFGMPTTVKNLYHGINRKPEPLSIDRA
QAMAIYEFAPGAQKTKDKAIHQVIGFTSDFIKVHNGIKNADTVNQLPFSLNRWFVRCRAC
GFFETYSEERKAELESQSEFDVCPNCGEDNPKKYQPPFKLKSPRAYRTNLSAGSDTKDDS
EFLLSRPPIFAEKTGSANLETISNASISISDNDVTWRVNTNSDKFFTGRLYNTNNRFPFN
SNGYWFNNQWLLNDFATNVPDENGYSMLVQQIVTSEDEQIALASNKNTEIFRIAPANVSY
ELDLNMFFSETDLPHVKAQSNGVRSGYYSAAFLLQRILADKLDVDPTEIEIADISMKELE
DGRRIAEIILTDELPNGSGFVRYLYNNLANILSESINPSNANSYLGKIHSETHQGKCDDA
CYDCLKVFRNMNYHSLLDWRLGISMLRVMNDSTFVCGADGNFNFVELQNWFAFATELRNA
FAQSFGFLNTAEINGLPIIKFGRNQRNVIMIVHPFWNMRNFTEANWLAEIYNEIKEHTES
NGGKISIIDTFNLHRRPGWCYEKLIER
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacccaataggttcgtttgaaaccataaaagaaaattttatacgctatgtaaaa
acagcgttcggaacaaagtttgaaggcgttgaaaaagagcgttacgatttgctgaattac
gacaaagttctttatcgtaaaccttggattgagccattgccagactatgtttcaagtgga
aaaaaaattaatgacttaacagccgaagatttaggaaatgctttgaacgaaggagaagtc
gaaacattcaaaggacttgtaaataccggtcttgtagggaatttccctttgcattcgcac
caagcggaaatgttgaaacaagcattgcttggaaataattgcattatcacttccggtaca
ggttcaggaaaaacagaatcctttttgcttccgttgtttgctcaactttcaaaagaactt
gcaaattggacagcacccaatcagcaatctacaaacttaaattcttggtggcgtgaaaat
ggtgggctttctgcaaggcaaattgtcaataattcaaatttcacattaagcaacgatgta
agacaacgcaatcacgaaacacgaaaagccggtgtaagagcattgattctttatccgatg
aacgctttggtggaagaccaaatgagccgtttgcgtaaagcgttagattctgacgacaca
agaaattggttaagcgaaaacacaaacggaaataaaatttattttggacgatacaacgga
agttcgcctgttgccggtgagttgaagaaaataaaagatgacggaacttttgcaatcaat
acaaacaaagtaaatcaactcaaagaacagttacagcaaattgaaacggattcaaaccgt
gttgcacaatacattcaacaaacaggaaaaacaggaaacgatgcaaaagatttaaaatca
tttttccaacacttagacggtgcagaaatgagaagtcgttttgatatgcaagttgcacct
cccgacattatgattacaaactactcaatgttgagcataatgttaatgcgtgatattgac
aaaggaatttttaatgaaacaaaacaatggttagaagaaagcgaaaaaaacatttttcac
ttaatcattgatgagttgcacttatacagaggaacgcaaggaacagaagttgcatatttg
ctcaaacttgttcttaatcgtttagggttagatcctaatcacccacaattacgaattctt
gcttcaagtgcttcgttggaagcaaaagaagaaacgaaagaaggacaggaaagcaagcag
tttttgaaagacttttttggaacagaaaaaccgttcaaaattattgaaggaaaaaataat
ccgattactgcattccctgaaaatgaaaaaaaaatcccaataaatcctttcaaagaaatt
gcgaaaatattttcggaagtaaaaggaaatattactgacgtaaatttcatctcaacttgt
gaagcaagtgcaacacaacttgcaacagcgtttaatttatcacaagacggaaacggaatt
tcaaaactaatttcagtaataatcaatccaagctttcaattaaaagaacgtttgttttcg
ccttgtcaagattacaaagcagtttgttcaacccaagcaaccggtgatgatgataacgga
aaatattttgctgaaacaatatttgaaagaacatccaataaagaagatttagaaaaagct
ttgcgtggtttgttgattgtgagagcgatgttagacgaaaaagaatttgaagacatcgca
aaaacaattcctgacgataggaaattaccacgttttagatttcactatttctttagaaac
attgaaggaatttgggcatctgttaaaccagacgaaattgaccagaaatattcagacgga
ggaaggactgttggtaaactttattcaactacacgaataaattcagaaaaaggaaaccgt
gttttagaattactctattgtgataattgcggaacaaccttatttggtggtagccgatta
gtaactagaaatgaatcgggaaacaactcttttgaaatgcttccgattagccctaacatt
gaaggtattcctgaaaaaacgcctgccaaattggttgaaaggcgaagttaccaagaatac
gctgtattttgggcttgcggaaatcaacaatacacgccacacgatgcggaagcaggtatt
ccgcaagttggctggcgacaaccaactttgaacggttttaatcaaactgattttcttgca
gattggattcccgcttcactgaattgtatttcgggcgacattgataattcacataacaag
gcggacgaaaaacctgaacaatggataaaaggatattatttcatcattacaaacaattca
aatcgtgacattgctttacctgatgcaaatggaaacatttctgagattgaaacacacaaa
gcattaccaagcgtttgtccaagctgtggcgtaaatcatcaaaaaagacgacaagattgg
aataaaaataaaacttcttctattcgtggttttagaaccggtttcgctaaaacaacacaa
atgtttgcaaaggaattgatgtatcaacttccgaatagcgaagccgaaagaaaattagtt
gttttttctgatagtagagaagatgcagcccaaattgcaaacggaattgaacgcaatcac
ttttctgatttaatgcgtgaagttttagtcaaagaattgcattcaaacttgatgttccgt
tttcaaattgtagatgcttttgacaaaggcaatacaaaaagaaaacaagaactaaaagag
caatcgcaaacaatttttgatgaaattgaattcttagttgaaaattccgcttacacagga
acaaacgcaagccgcatacgagaaaaacaaaaagcagaaataaagttgaacgaaatccgt
tcgctgactttgaatgtaagaagtttagttcacatcacaaattcattaaatcttgcaccc
ctcattaaacactttgttggtttaggaataaatccaggcggtaatgacattgctttacaa
acaaggttattgaacaacaattttgttccttggtatgacctgattgattttacaaatttt
caatgggcagctggtgcgaaccaagattacattgatgcattgaaagaaggttcatttgac
ggtcttgctacaatatttttcggttcgctgttttattcgtttgaatcttccgcattggga
tatgtttgtataaatcctgaattacaggttatcacagaccaagcaagaactgttgcttta
gcaaaagatgattttttacaaatcgtaaattcctcaatccggattttgggtgataaatac
aaacacaacaaagttgaagatgcaagtccattcaactttacgcaatacaacgattttccc
ggacaagtcaaaaaatacatacgtgcagttgaaacaaggtattcaaaaaatcaaaacgaa
attggcgatgccgtttttaatacgctttcaacaagtagtttattgagaggcgacacaggc
attcaaattgaaaacctttttatcaaagtggcacgttccacggattcgatttggacaagt
caaagaggaagcagaccacacttgcattttagcggtggtatttgcactcattctgttacg
gcactgcaacagcaaccggacagaatttgtgatgatgtttggaaagaaaattatctttct
tacaacgccattaagcaacaacgtgaaccaatccgtttgcattgcgaagaactcaccgga
caaacagatgaccaatttgaaagacaaagacatttcagaaatatcattttaccagatgaa
ggcaacaaacaagtcaaaacaatagacttattaagcgtaacaacaacacttgaagttggt
gttgatatcggtgcattgcaagctgtgatgttgggtaatatgccaccgcaacgtttcaac
tatcaacaaagagttggtcgtgcaggacgtagaggacaagcttattccgttattttaaca
ttttgtagaggtagaagccacgatgagttttactttgctaaccctcaaaaaattacaggc
gatgctccaccaacacctttcttgacaatgggacaagaaaggatttttaaacgtttgctt
gcaaaagaaatttttcgcaaagcatacgttgaaaaagaaattaacattacttccgatgat
aaatcaagtgttcacggagaatttggttcagttgatagttggacgatttacaaacctgaa
atttctaattggataaatgaaaacagaactgtcatcgaacaaacagtagatgcattacta
acgccacagctaaaagacaagaaagatgaatttgtaaattgggttgcagatacaacaacg
ccaaatggtttaattgaaaaagcagaaagcattatcaataatgaagaaattgcaagtaat
gacatttctgaaaaatttgccgaaggcggaattttgccaatgtttggaatgccgacaaca
gttaaaaacttgtaccacggtataaacaggaaaccagaaccactttcaattgacagagca
caagcaatggcaatttatgaatttgcaccgggagcacagaaaacaaaagacaaagctatt
catcaagtaattggttttacaagcgattttatcaaggttcacaatggcattaaaaatgct
gacacagtcaatcaacttcccttttcacttaaccgttggtttgtacgctgtagggcttgc
ggattttttgaaacgtattccgaagaacgaaaagcagaattggaaagtcaaagtgaattt
gatgtttgtccaaattgtggtgaagacaatccgaaaaaatatcaaccgccatttaaactg
aaatcgccaagagcatacagaacaaatctttcagccggaagcgacacaaaagatgattct
gaatttttgctttcacgtccgccaatttttgcagagaaaacaggttcagcaaacttagaa
actataagtaacgcttcaatttctatttctgataatgatgttacttggcgtgtgaataca
aattcagataaattttttacaggacgactttacaatacaaataaccgttttccttttaat
tcaaatggatattggttcaataaccaatggttattaaatgactttgcaacaaatgtccct
gatgaaaatggctattctatgcttgtacagcaaatcgtaactagtgaagacgagcaaatt
gcgttagcgagcaataaaaacacagagatattcagaattgcaccagcaaatgtttcgtat
gaacttgacttaaatatgttttttagcgaaacagatttgccacacgtcaaagcacaaagt
aacggagtgcgttccggttattattccgcagcatttttacttcaaagaattttagcagac
aaacttgacgttgacccaacagaaattgaaattgctgatatttcaatgaaagaacttgaa
gacggaagaagaattgctgaaattatcttgactgatgaattaccaaacggttcgggtttc
gtaagatatttatacaacaatcttgcaaacattctttcagaatccataaatccaagtaat
gcgaatagttatttagggaaaattcattcggaaactcatcaaggaaaatgtgatgatgct
tgttatgattgtttgaaagttttccggaatatgaattatcatagtttgcttgattggcgt
ttaggtatatcaatgcttcgtgtaatgaatgattcaacttttgtttgcggtgcggacgga
aatttcaactttgttgaattgcagaattggttcgcatttgcaacagaattaagaaatgct
tttgctcaaagttttggtttcttaaatacagccgagataaatggtttgccaattatcaaa
tttggaagaaatcaaagaaacgtgataatgattgttcacccattttggaatatgagaaat
ttcacggaagcaaattggttggcggaaatttacaatgaaataaaagaacatacagagagt
aatggtggaaaaattagcataattgacacatttaacttgcatcgcagaccaggttggtgt
tatgaaaaattgattgagagatga
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