Sediminibacterium sp. TEGAF015: TEGAF0_13870
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Entry
TEGAF0_13870 CDS
T08564
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00260
Glycine, serine and threonine metabolism
sedt00460
Cyanoamino acid metabolism
sedt00630
Glyoxylate and dicarboxylate metabolism
sedt00670
One carbon pool by folate
sedt00680
Methane metabolism
sedt01100
Metabolic pathways
sedt01110
Biosynthesis of secondary metabolites
sedt01120
Microbial metabolism in diverse environments
sedt01200
Carbon metabolism
sedt01230
Biosynthesis of amino acids
sedt01240
Biosynthesis of cofactors
sedt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TEGAF0_13870 (glyA)
09102 Energy metabolism
00680 Methane metabolism
TEGAF0_13870 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TEGAF0_13870 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TEGAF0_13870 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TEGAF0_13870 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TEGAF0_13870 (glyA)
Enzymes [BR:
sedt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TEGAF0_13870 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
BDQ12170
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Position
1546459..1547739
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AA seq
426 aa
AA seq
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MQRDTLVFDLIRKELERQRHGIELIASENFTSLQVMQAMGNVMTNKYAEGYPGRRYYAGC
EIVDQTEQLAIDRLKEIFGVEYANVQPHSGAQANAAVALAVLQPGDATLGLDLSMGGHLT
HGSAVNYSGKLYRPHFYGVTREEGLIDYEMLEAKAREVKPKLIYCGASAYSRDWDYARIR
KVADEVGALVMADIAHPAGLIAKKLLNSPFEHCHFVTSTTHKTLRGPRGGIIMMQKDFEN
PWGLKDVKGNIRMMSNLLDMAVFPGIQGGPLQHVIAAKAVAFGEILSDEFLVYQQQVQKN
AQAMAKEFVNKGYHIISGGTDNHLMLIDLRNKNISGKKAEQALVQADITANKNMVPFDDK
SAFVTSGIRFGVPAITTRGMKEEHMPFVVDAIDKVLMNADDAASITAVRKDVNAFMEQFI
LYPEMG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagatacactggtttttgacctgatcagaaaagaattagaaagacaaagacac
ggaattgaattgattgcttcagaaaattttaccagtctgcaagtaatgcaggccatgggc
aatgtgatgaccaataaatacgccgaaggttatccaggcagaaggtattatgctggttgt
gaaattgtggaccaaacagaacaattggccattgacagactaaaagaaatttttggtgta
gaatatgccaacgtgcaaccccatagtggagctcaggcaaatgcagctgttgcattagcg
gtattgcaaccgggtgacgctaccttaggccttgacctaagcatgggcggacatttaacc
catggcagtgcagtaaactattccggtaaattgtatcgtccgcatttttatggtgttacc
agagaagaaggattgattgattatgaaatgctggaagccaaagcccgcgaagtaaaacct
aaattaatttattgtggtgcatctgcttacagcagagactgggactatgccagaatcaga
aaagtggccgatgaagtaggtgcattggtaatggccgacattgcgcatcctgcaggtttg
attgccaaaaaattattgaattccccctttgagcattgtcattttgttacttctactaca
cacaaaaccttgcgtggaccaagaggtggtatcataatgatgcagaaggattttgaaaat
ccatggggattaaaagacgtgaaaggcaatatcagaatgatgagcaacttgctagacatg
gcggttttcccgggcatccagggcggaccattgcagcacgtaattgctgctaaagcagtt
gcctttggagaaatcttatctgacgaatttctggtttaccagcaacaggtgcagaagaat
gcacaggccatggccaaagagtttgtaaacaaaggctatcatatcattagtggcggtacc
gataaccacctgatgctgattgacctgagaaataaaaatatcagcggtaaaaaagcagaa
caggcattggtgcaggcagatattactgccaacaagaatatggttccttttgatgataaa
tctgcttttgttacttccggtattcgctttggcgttcctgccattactaccagaggaatg
aaagaggaacatatgccttttgtagttgatgccattgataaggtgttgatgaatgcagat
gatgctgcatcaatcacagcagttcgtaaagacgtaaatgccttcatggaacaatttatt
ttatatcctgaaatgggctaa
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