KEGG   Sediminibacterium sp. TEGAF015: TEGAF0_13870
Entry
TEGAF0_13870      CDS       T08564                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
sedt  Sediminibacterium sp. TEGAF015
Pathway
sedt00260  Glycine, serine and threonine metabolism
sedt00460  Cyanoamino acid metabolism
sedt00630  Glyoxylate and dicarboxylate metabolism
sedt00670  One carbon pool by folate
sedt00680  Methane metabolism
sedt01100  Metabolic pathways
sedt01110  Biosynthesis of secondary metabolites
sedt01120  Microbial metabolism in diverse environments
sedt01200  Carbon metabolism
sedt01230  Biosynthesis of amino acids
sedt01240  Biosynthesis of cofactors
sedt04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:sedt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    TEGAF0_13870 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    TEGAF0_13870 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TEGAF0_13870 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    TEGAF0_13870 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    TEGAF0_13870 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    TEGAF0_13870 (glyA)
Enzymes [BR:sedt01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     TEGAF0_13870 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase WD40_Prp19
Other DBs
NCBI-ProteinID: BDQ12170
LinkDB
Position
1546459..1547739
AA seq 426 aa
MQRDTLVFDLIRKELERQRHGIELIASENFTSLQVMQAMGNVMTNKYAEGYPGRRYYAGC
EIVDQTEQLAIDRLKEIFGVEYANVQPHSGAQANAAVALAVLQPGDATLGLDLSMGGHLT
HGSAVNYSGKLYRPHFYGVTREEGLIDYEMLEAKAREVKPKLIYCGASAYSRDWDYARIR
KVADEVGALVMADIAHPAGLIAKKLLNSPFEHCHFVTSTTHKTLRGPRGGIIMMQKDFEN
PWGLKDVKGNIRMMSNLLDMAVFPGIQGGPLQHVIAAKAVAFGEILSDEFLVYQQQVQKN
AQAMAKEFVNKGYHIISGGTDNHLMLIDLRNKNISGKKAEQALVQADITANKNMVPFDDK
SAFVTSGIRFGVPAITTRGMKEEHMPFVVDAIDKVLMNADDAASITAVRKDVNAFMEQFI
LYPEMG
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgcagagagatacactggtttttgacctgatcagaaaagaattagaaagacaaagacac
ggaattgaattgattgcttcagaaaattttaccagtctgcaagtaatgcaggccatgggc
aatgtgatgaccaataaatacgccgaaggttatccaggcagaaggtattatgctggttgt
gaaattgtggaccaaacagaacaattggccattgacagactaaaagaaatttttggtgta
gaatatgccaacgtgcaaccccatagtggagctcaggcaaatgcagctgttgcattagcg
gtattgcaaccgggtgacgctaccttaggccttgacctaagcatgggcggacatttaacc
catggcagtgcagtaaactattccggtaaattgtatcgtccgcatttttatggtgttacc
agagaagaaggattgattgattatgaaatgctggaagccaaagcccgcgaagtaaaacct
aaattaatttattgtggtgcatctgcttacagcagagactgggactatgccagaatcaga
aaagtggccgatgaagtaggtgcattggtaatggccgacattgcgcatcctgcaggtttg
attgccaaaaaattattgaattccccctttgagcattgtcattttgttacttctactaca
cacaaaaccttgcgtggaccaagaggtggtatcataatgatgcagaaggattttgaaaat
ccatggggattaaaagacgtgaaaggcaatatcagaatgatgagcaacttgctagacatg
gcggttttcccgggcatccagggcggaccattgcagcacgtaattgctgctaaagcagtt
gcctttggagaaatcttatctgacgaatttctggtttaccagcaacaggtgcagaagaat
gcacaggccatggccaaagagtttgtaaacaaaggctatcatatcattagtggcggtacc
gataaccacctgatgctgattgacctgagaaataaaaatatcagcggtaaaaaagcagaa
caggcattggtgcaggcagatattactgccaacaagaatatggttccttttgatgataaa
tctgcttttgttacttccggtattcgctttggcgttcctgccattactaccagaggaatg
aaagaggaacatatgccttttgtagttgatgccattgataaggtgttgatgaatgcagat
gatgctgcatcaatcacagcagttcgtaaagacgtaaatgccttcatggaacaatttatt
ttatatcctgaaatgggctaa

DBGET integrated database retrieval system