Sediminibacterium sp. TEGAF015: TEGAF0_14470
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Entry
TEGAF0_14470 CDS
T08564
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TEGAF0_14470 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedt01007
]
TEGAF0_14470 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedt03016
]
TEGAF0_14470 (glyS)
03029 Mitochondrial biogenesis [BR:
sedt03029
]
TEGAF0_14470 (glyS)
Enzymes [BR:
sedt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
TEGAF0_14470 (glyS)
Amino acid related enzymes [BR:
sedt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TEGAF0_14470 (glyS)
Transfer RNA biogenesis [BR:
sedt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TEGAF0_14470 (glyS)
Mitochondrial biogenesis [BR:
sedt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TEGAF0_14470 (glyS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BDQ12230
LinkDB
All DBs
Position
complement(1623360..1624826)
Genome browser
AA seq
488 aa
AA seq
DB search
MSTATENSFQAIISHAKEYGFVYQSSEIYDGLSAVYDYGPYGSELKKNIKDYWWKSMTQL
HQNIVGIDAAIFMHPTTWKASGHVDNFSDPMIDNKDSQKRYRVDHIIEAKADQLKEAGKS
AEADALLAKMDQLLAAEDFAGLKQLLADYQIVCSVSGTGNWTDIRQFNLMFSTQLGSVAE
ESDTIYLRPETAQGIFVNFLNVQKTARMKVPFGIAQIGKAFRNEIVARQFIFRMREFEQM
EMQFFVRPGTQMEWYNYWKQERLNWHLSLGLPAEKYRYHNHVKLAHYADAALDIEFEFPF
GFKEVEGIHSRTDFDLKSHQEYSKKKQQYFDNDIDEATGKPYGNYIPYVIETSIGLDRMF
LLILSNAYAEETITKEDGSTDSRVVLRIPAKIAPNKLAILPLVKKDGLPEIARELMDDCK
GAFKCFYEEKDAIGKRYRRQDAIGTPFCVTIDHQTKEDNMVTIRHRDSMVQERIPISKVK
ELVLSHIS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcaaccgaaaacagttttcaggcaattatttcacatgccaaagagtatggt
tttgtataccagagtagcgaaatttatgatggccttagtgccgtttatgattacggtcca
tatggcagtgaattaaaaaagaatataaaagactactggtggaaaagcatgacgcagctt
caccagaatatagtaggtattgatgcggccatttttatgcaccccactacctggaaagct
agcggtcacgttgataatttcagtgatccgatgattgacaataaagacagtcagaaaaga
taccgtgtagatcatattattgaggctaaggcagaccagctaaaagaagctggtaaatcg
gcagaggcagatgcgttactggcaaagatggatcagttgctggctgcagaagattttgct
gggttaaaacagttactggccgattatcagattgtatgttccgttagtggaacgggtaac
tggaccgacatccgtcagtttaatctgatgttttctactcaactgggttcggtagcagag
gaatctgatactatttatttaagaccagaaacggcacagggcatttttgtcaatttcctg
aatgtgcaaaaaacagccagaatgaaagtgccatttggcattgctcagattggtaaagca
ttccgcaatgaaattgttgctcgtcagttcattttccgtatgcgtgaatttgaacaaatg
gaaatgcagttttttgtaagacctggcactcaaatggaatggtacaactactggaaacag
gaaagactgaactggcatttaagtctgggtcttcctgctgaaaaataccgttaccataat
cacgtaaaactggcgcattatgcagatgcagctttggatattgaatttgaatttccattc
ggctttaaagaagtggaaggcatccatagcagaacagatttcgatttaaagagtcaccag
gagtatagcaagaaaaagcagcaatattttgataatgatattgatgaagccactggtaag
ccttatggaaattatattccttatgtaattgaaacttctattggtttggatcgtatgttc
ttactgatcttgagtaatgcctatgcagaagaaaccattaccaaagaagatggttctaca
gatagtagagtagtattaagaatcccggctaaaattgctccgaataaattagctattctg
ccattggtgaaaaaagatggactacctgaaattgcgcgtgaactcatggacgattgtaag
ggagcatttaaatgtttctacgaagaaaaagatgccattggtaaacgttatcgtcgtcag
gatgccattggtacgccattctgtgttaccattgatcatcagacaaaggaagacaatatg
gtaaccatacgtcacagagacagcatggtgcaggagcgtattcctatcagtaaggtaaaa
gaattggtactatcgcatatcagctga
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