Sediminibacterium sp. TEGAF015: TEGAF0_15400
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Entry
TEGAF0_15400 CDS
T08564
Symbol
icd_2
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00020
Citrate cycle (TCA cycle)
sedt00480
Glutathione metabolism
sedt00720
Other carbon fixation pathways
sedt01100
Metabolic pathways
sedt01110
Biosynthesis of secondary metabolites
sedt01120
Microbial metabolism in diverse environments
sedt01200
Carbon metabolism
sedt01210
2-Oxocarboxylic acid metabolism
sedt01230
Biosynthesis of amino acids
sedt04146
Peroxisome
Module
sedt_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TEGAF0_15400 (icd_2)
09102 Energy metabolism
00720 Other carbon fixation pathways
TEGAF0_15400 (icd_2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TEGAF0_15400 (icd_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TEGAF0_15400 (icd_2)
Enzymes [BR:
sedt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
TEGAF0_15400 (icd_2)
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Isocitrate_DH_C_bact
PdxA
Motif
Other DBs
NCBI-ProteinID:
BDQ12323
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Position
complement(1722283..1723737)
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AA seq
484 aa
AA seq
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MTKIAVAKGDGIGPEIMDAVLSIFNAANVPLEYQVVEMGKWVFDKGYSNGMTPEAQQTIE
SLGILFKGPMETPKGKGVKSVNVTARKTWNTYANKRTFQTLHGVDTVFSKAGVPIDITIV
RENIEDTYGGIEHMLTNDVALSRRFITRPGSAQVIRYAFEMAKKKGCRRITCGHKANIMK
LTDGLFLEVFYEIAKEYPELKADDVIVDDLCMKLVSRPDLFDVVVLTNLQGDIVSDLCAG
LVGGLGFAPSANIGDHISIFEAVHGTAPDIAGKNIANPTALLLSGFGMLRHLGLMQSAAM
IENALLYTLESGQHTGDFGDKNTTALNTTEFANAIIANFGKQPAHNPKPLLNDAAITPTV
FKLEHNPMLESKEEMNEFIVGVDMFIESNEQPTIVADKCLQHTFDLFKLVTISNRGTQVW
PKGSVFTNLVNQYRCRFESVGDQPLTQTDIVELYKRLTADFKVCSTEILNMWGDKKAYSL
AQGQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaattgctgtagctaaaggagatggaattggtccagaaattatggacgctgtt
ttgtccatttttaatgccgccaatgtaccccttgaatatcaggtagttgaaatgggaaaa
tgggtgttcgacaaaggctacagcaacgggatgactccggaagcgcagcaaaccattgag
tcattgggtatattatttaaagggcctatggaaacaccaaaaggcaagggagtgaaaagt
gtgaatgtaactgcccgcaaaacatggaatacttacgcaaacaaaagaacattccagaca
ctacatggcgtagatactgtttttagtaaagccggagtgcctattgatataacgattgta
agggaaaatattgaagatacttatggtggtattgagcatatgcttacgaacgacgttgca
ttgagcagacgattcattacacgtccaggtagtgctcaggtaatccgttatgcatttgaa
atggctaagaagaaagggtgcagaagaattacctgcggacataaagccaatatcatgaaa
cttactgacggtttattccttgaagtgttttatgaaattgccaaggaatatccggaacta
aaagcggatgatgtaattgttgatgatttatgtatgaagctagttagccgccctgattta
tttgatgtggtggtactaactaacttacagggtgatattgtaagcgatctttgcgctggt
ttggtaggcgggctaggatttgctccttctgctaatattggggatcatatttccatattt
gaagcagtgcatggtactgcaccagatatagctggtaagaatattgcgaatccaacagct
ttattgttaagtgggtttggcatgcttcgtcacctcggattgatgcagtccgcagcaatg
attgagaatgctctcttgtacaccctagaatctggtcagcatacaggtgactttggtgat
aagaacacaactgcattaaataccactgaatttgcaaatgccattattgccaactttggt
aagcaacctgctcacaatccaaaaccgctattgaatgatgcggccatcaccccaactgta
ttcaaactagagcacaacccaatgttggaatccaaggaggaaatgaatgaatttattgtt
ggagtagatatgttcatagaaagcaatgaacagcctactatagtagcagataaatgttta
cagcatacctttgatttatttaaactggtaactatcagtaaccgtggtacccaggtatgg
cctaaaggttcggtgttcaccaatttggtaaaccagtaccgttgtcgttttgagagtgtg
ggtgaccaaccactgacccagaccgatatcgttgaactatacaagcgccttacggctgat
tttaaagtatgttcaacagaaattttgaatatgtggggcgataaaaaagcctacagtctg
gcacaggggcagtaa
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