Sediminibacterium sp. TEGAF015: TEGAF0_17270
Help
Entry
TEGAF0_17270 CDS
T08564
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00061
Fatty acid biosynthesis
sedt00071
Fatty acid degradation
sedt01100
Metabolic pathways
sedt01212
Fatty acid metabolism
sedt02024
Quorum sensing
sedt04146
Peroxisome
Module
sedt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TEGAF0_17270 (fadD)
00071 Fatty acid degradation
TEGAF0_17270 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TEGAF0_17270 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEGAF0_17270 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sedt01004
]
TEGAF0_17270 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sedt04147
]
TEGAF0_17270 (fadD)
Enzymes [BR:
sedt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TEGAF0_17270 (fadD)
Lipid biosynthesis proteins [BR:
sedt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TEGAF0_17270 (fadD)
Exosome [BR:
sedt04147
]
Exosomal proteins
Exosomal proteins of breast milk
TEGAF0_17270 (fadD)
Exosomal proteins of breast cancer cells
TEGAF0_17270 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BDQ12510
LinkDB
All DBs
Position
complement(1941962..1943746)
Genome browser
AA seq
594 aa
AA seq
DB search
MTIKRLFDAIQHQLDHFPKQDMLSAKINGEWKKYSTAEVADTVNRLSAGLLSLGVRANDF
SPEGSDKIAIISNNRPEWVFTDLAVQQIGAILVPVYPTTNPNELTFILNDAAVKYIFVSN
EELLSKVNSIVDKVPSLQGMYTFDTIAGAKHWSEVTQLATSSLLTDVDRIKASVPVDHLA
TIIYTSGTTGTPKGVMLSHSNIYNNVQFSKKSFPFNDAPESKVLSFLPLNHIFEKTCTYI
YLYSGISIYYAESLDTIGDNLKEIKPNGFTTVPRLLEKVFEKIMAKGNELTGTKRKLFFW
AVDLAEKYDNRVSGGLWYNIQLAIANKLIFSKWREALGGNISFIITGGAACQVKLLRIFN
AAGVPVYEGYGPTENSPVICVNRQEKGGTKFGTVGPAIDGIQVKLAEDGEILVTGPCVMK
GYYKRPDLTAETVVDGWLLTGDIGIWDENKFLKITDRKKELFKTSGGKYVAPQPIENKLK
ESPFVEQVMVVGSERKFVGALIVPSFATLKEWMREKNIPFTTNEDVIHHPKVLELYRELV
ESFNKFFNHVEQIKKFELLPNEWTVDTGEMTPKLSLKRKVVNEKFKDAIERIYA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgactataaagcgactttttgatgccatacagcaccagctggatcattttccgaaacag
gatatgttgtcggctaaaataaatggagaatggaaaaaatatagtactgcggaagtggca
gatacggtgaaccgattaagtgcaggtttgctatccctaggggttcgtgccaacgacttc
tctccagaaggcagcgataaaatagccattattagtaacaatcgtccagaatgggttttt
actgatttggctgtacagcagataggtgccatcttggttcccgtttatccaactaccaac
cctaatgaactaacttttattttaaatgatgcggcagttaaatacatttttgtaagcaac
gaagaattgctgtctaaagtcaatagcattgtagataaagtgccttctttacagggtatg
tatacatttgataccattgctggtgcaaagcattggtctgaagttacccaattggctacc
tcttctttattaactgacgtagatcgtataaaagcaagtgtgccggttgatcatttggct
accattatttatacttcaggtacaacgggtacacccaaaggtgttatgttgtcgcattca
aatatttataacaatgtgcaattcagcaaaaagagttttccttttaatgatgcaccggaa
tccaaagtgcttagctttcttccgctgaatcatatttttgaaaaaacctgcacctatatt
tatttgtacagcggcatcagtatttattatgcagaaagtttagataccattggggataac
ctcaaagaaataaaacccaatggatttactactgtgcctcgtttgctagaaaaagtattt
gaaaaaatcatggctaagggcaacgagttaacgggtaccaaaagaaagcttttcttctgg
gcagttgacctggctgaaaaatacgataacagagttagtggaggactttggtacaatatt
caactagccattgccaataaactaattttctctaaatggcgagaagcattgggtggaaat
atttcgtttatcataacgggaggcgcggcttgtcaggtaaagctcttgcgtattttcaac
gcagcaggtgtgccagtgtatgaaggctatggtcctacagaaaacagccctgttatttgc
gtaaatcgtcaggaaaaaggggggactaagtttgggacagtaggtcctgcgattgacggc
attcaagtgaaattagcagaggacggagaaattctagttacagggccgtgtgtgatgaag
ggatattacaaacgacctgatttaactgctgaaacagtagtagatggttggttgttaacg
ggtgatattggcatttgggatgaaaataaatttttgaaaatcacagatcgcaaaaaagaa
ttgtttaaaaccagcggagggaaatatgtagctcctcagccaatagaaaataaattaaaa
gagagcccatttgtagaacaagtaatggtggtgggttctgagcgaaagttcgtaggagcg
ctaattgttccttcttttgctacgttaaaagagtggatgagagaaaaaaatattcctttt
accaccaatgaagatgtgattcatcatccgaaagttctggaattgtatcgcgagttggtg
gaaagctttaataagttttttaaccatgttgaacagattaaaaagtttgaacttttgcct
aatgaatggacggttgacacaggtgaaatgacacccaagttgagcctgaaaagaaaagta
gtgaatgagaaattcaaagacgccatagaaagaatctatgcctga
DBGET
integrated database retrieval system
