Sediminibacterium sp. TEGAF015: TEGAF0_17480
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Entry
TEGAF0_17480 CDS
T08564
Symbol
hup
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedt03032
]
TEGAF0_17480 (hup)
03036 Chromosome and associated proteins [BR:
sedt03036
]
TEGAF0_17480 (hup)
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_17480 (hup)
DNA replication proteins [BR:
sedt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TEGAF0_17480 (hup)
Chromosome and associated proteins [BR:
sedt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TEGAF0_17480 (hup)
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TEGAF0_17480 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Arteri_nsp7a
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BDQ12531
LinkDB
All DBs
Position
1966658..1966927
Genome browser
AA seq
89 aa
AA seq
DB search
MNKAELIAHLADDAGITKTQANAALDSFIDAVTKTLKKGDKVTLVGFGTFSVSKRAARTG
RNPQTGETIKIKAKKVARFKAGKELSGKL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctgaattaatcgcgcacctagctgatgatgcaggtatcaccaaaacacaa
gcaaacgctgcattggattcttttattgatgcagttacaaaaaccttaaagaaaggtgat
aaagtaaccctagtaggtttcggtactttctctgtatctaagcgtgctgcacgtactggt
cgtaaccctcaaactggtgagactatcaaaattaaagctaagaaagttgctcgcttcaaa
gctggtaaagaattaagcggtaagttataa
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