Sediminibacterium sp. TEGAF015: TEGAF0_18010
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Entry
TEGAF0_18010 CDS
T08564
Name
(GenBank) tRNA-dihydrouridine synthase
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedt03016
]
TEGAF0_18010
Transfer RNA biogenesis [BR:
sedt03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
TEGAF0_18010
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GFIT
Motif
Pfam:
Dus
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
BDQ12584
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Position
2016914..2017954
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AA seq
346 aa
AA seq
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MVKIDQIELPDFPLLLAPMEDVSDPPFRAVCKDNGADLMYTEFISSEGLIRDAIKSRQKL
DIFEYERPVGIQIFGGDEEALSLSAKIVETVNPDLLDINFGCPVKKVALRGAGAGVLKDI
DLMVRLTEATVKSTKLPVTVKTRLGWDDQSKNIEEVAERLQDVGIKALAIHGRTRAQMYK
GEADWTLIGKVKNNPRIKIPIFGNGDIDSPQKAKLYKERYGVDGIMIGRAAIGYPWIFRE
IKHYLATGEVLPAPTLAERIEVCKKHLRKSVEWKGPKVGIFEMRRHYTNYLKGLPGIKDY
RARLVTLMEPAEIEGVLDEVTANYTGYEFERTPIELIDYHQKCPID
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatagatcaaatagaacttcccgacttccctttgttactggcgcctatggaa
gatgtaagcgatcctccgttcagggcggtatgcaaagacaatggggccgacctgatgtat
accgaattcatcagtagtgagggattgattcgtgatgccattaaaagcagacagaagctc
gacatatttgaatacgaacgtccagtgggcattcagatttttggaggagacgaagaagca
ctttccctgagtgcaaaaattgtagaaacggtaaatccagatttactcgatattaacttt
ggttgccctgtaaagaaagtggcattaagaggtgccggtgcaggtgttttgaaagatatt
gacctgatggttcgcttaacggaagcaacggtaaaaagtaccaagctacccgttaccgta
aaaactagactgggctgggacgatcagagtaagaacatagaagaagtagcggaaagatta
caggatgttggtataaaagcactggccattcatggaagaacaagagcgcagatgtataaa
ggtgaggcagactggaccttgattggaaaagtaaagaacaaccccagaatcaagataccc
atttttggaaatggagatatagacagccctcaaaaagcaaaactttataaggagcgttac
ggtgtagatggcatcatgattggaagagcagccattggatatccatggattttcagagaa
atcaaacattacctggccactggtgaagtgttacccgcacctaccctagcagaaagaatt
gaagtgtgtaaaaaacatttacgcaaatcagttgaatggaagggacccaaagtaggcatc
ttcgaaatgcgcagacattatacaaactatttgaaaggtttgcccggcattaaagactac
agagccagattggtaaccttaatggagccagctgaaattgaaggggtactagacgaagta
actgcaaattatacaggctatgaattcgaaagaacgcctattgaattaattgactatcac
caaaaatgtcccattgactag
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