Sediminibacterium sp. TEGAF015: TEGAF0_20110
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Entry
TEGAF0_20110 CDS
T08564
Symbol
phrB2
Name
(GenBank) FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_20110 (phrB2)
Enzymes [BR:
sedt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TEGAF0_20110 (phrB2)
DNA repair and recombination proteins [BR:
sedt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TEGAF0_20110 (phrB2)
Prokaryotic type
TEGAF0_20110 (phrB2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDQ12794
LinkDB
All DBs
Position
complement(2255525..2257009)
Genome browser
AA seq
494 aa
AA seq
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MENRKSINLVWLKRDLRTQDHTPLNAAEQAGLPYLIVFLFEPSIIQYTDTSARHLQFQYH
SVCAMNKILSVYKRRVTIFYAEAIDAFEEIAEQYKIQHIYSYQESGIQITYDRDKKVKAY
CKAHQIEWIEFQRDGIIRGIKNRKDWDKNWYKSMHAPIIQNGYSLNSLPFFESKYTIPIQ
LQHLLQDYAKAFQPAGEENAHRYLQTFITDRGRFYSKHISKPKESRKSCTRLSPYISWGN
LSIKQAYQALHEAQKTSSFKGPISNAITRLKWHCHFIQKFEVEGRYEFECINKGYELLEH
PPNQTFIKAWEEGKTGFPLVDACMRCLITTGWVNFRMRAMLVSFLCHHLYQDWRWGAHHL
AKQFLDYEPGIHYPQFQMQAGTTGVNTIRIYNPIKQSGDHDPEGTFIKKWVPELQTVPAA
FIHEPYKMSMMEQQLSNTIIGKDYPFPIVDATKAGRNARDKIWNHRKELLVKQETERILF
THTRNKNQTNSIRK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatcggaaatctattaaccttgtttggctaaaaagagatctgcgaacgcaggat
cacacacccttgaatgctgctgagcaagcgggcctaccgtatttaatcgtttttttattt
gagccttctatcattcaatacaccgataccagtgctaggcatttacaatttcagtatcat
tctgtatgcgcgatgaataaaattttatccgtctataaaagaagggtaactatcttttac
gcagaagccattgatgcatttgaagagattgcggagcaatataaaattcaacatatttat
agctatcaagagtcgggtatccaaattacgtatgatagagacaagaaggtaaaagcgtat
tgcaaagcacatcaaattgaatggatagagtttcaacgagatggaattatccgagggatt
aaaaatagaaaggactgggataaaaattggtataaaagcatgcatgcacccataattcaa
aatgggtacagcctcaattcacttcctttctttgaatcaaaatatacgattccaatccag
ttacagcatctattgcaagattacgccaaagcatttcagccagcaggagaagaaaatgcc
catcgatatttgcaaacctttattactgatagaggacgattctatagtaaacatatcagt
aagccaaaagagagcagaaaaagctgtacccgtctatcgccctatatcagctggggtaac
ctgagtataaaacaagcttatcaggcgttgcatgaagcacaaaaaacctcttccttcaag
ggtcctatcagcaacgccatcacccgcttaaaatggcactgtcattttattcaaaaattt
gaagtagaggggagatatgagtttgaatgtatcaacaaagggtatgaactgctagaacat
ccccccaatcaaacttttatcaaagcatgggaagaaggtaaaacaggttttccattggta
gatgcctgtatgcgttgtttgattacaactggttgggttaattttaggatgcgtgccatg
ctggtttcctttttatgtcaccatctttaccaagactggagatggggtgcgcatcatctg
gcgaaacaatttttagattacgaacccggcattcattatccccagtttcaaatgcaggca
ggtactaccggggtgaatactattcggatatataaccccattaagcaatccggcgatcat
gatcccgaagggacgtttataaaaaaatgggttcctgaattacaaactgttccggcagca
tttattcatgagccgtataagatgagcatgatggaacagcaacttagcaataccatcatc
ggaaaagattatccattccctattgtagacgctactaaagccggaagaaatgcgagagat
aaaatatggaatcaccgaaaagaattattggtaaaacaagaaacggaaaggattctattt
acgcatactcgaaataaaaatcaaacaaactcaatcagaaagtag
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