Sediminibacterium sp. TEGAF015: TEGAF0_22710
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Entry
TEGAF0_22710 CDS
T08564
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00051
Fructose and mannose metabolism
sedt00541
Biosynthesis of various nucleotide sugars
sedt01100
Metabolic pathways
sedt01250
Biosynthesis of nucleotide sugars
Module
sedt_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
TEGAF0_22710 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
TEGAF0_22710 (gmd)
Enzymes [BR:
sedt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
TEGAF0_22710 (gmd)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BDQ13054
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Position
2564143..2565258
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AA seq
371 aa
AA seq
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MKKALITGITGQDGAYLAELLLKKGYEVHGIKRRSSLFNTQRIDHFYEDPHIPDRHMVLH
YGDLTDSTNLIRIIQEVQPDEIYNLAAMSHVHVSFETPEYTANADGVGALRILEAIRLLG
LTKKTKFYQASTSELYGLVQAVPQSETTPFYPRSPYAVAKLYAYWITVNYREAYGMYACN
GILFNHESPLRGETFVTRKITRAVARISMGLQDVLYLGNLDAQRDWGHAKDYVEGMWLML
QQEQPEDFVLATGVTTYIRDFVRMAFAEVGVTLAFSGEGVNEIGTIAAIENVQHSSMKVG
QVVVKVDPRYYRPTEVDLLIGDATKAKKKLNWSPKYTLAEMVKEMVAADIVLFKKEQLLK
DNGFATEKEHE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcattaattacgggcatcaccggccaggacggtgcatatttagcagaactg
ctgctgaagaagggctatgaagtgcatggaatcaagcgcaggagttcgcttttcaataca
caaagaatcgatcatttttacgaggacccacatattccagaccgacatatggtactgcat
tacggcgatttaactgatagtacgaatttgattcggattattcaggaagtgcagcccgat
gaaatttataaccttgctgccatgagtcatgtgcatgtgagttttgaaacacccgaatac
accgccaatgcggatggagtgggagcattgagaatattggaggcaatacgtttgctgggg
ttaactaaaaagacaaaattctatcaggcatctacctcagaattatatggattggtacag
gctgttccgcaaagtgaaaccacgccattttatcccagaagcccttatgcggtagctaag
ttatatgcttactggattacagtgaattacagagaagcctatggcatgtatgcctgcaat
ggaattttattcaatcatgaaagtccgttaagaggagaaacttttgtaacccgaaaaatt
acccgcgccgtagcccgtatttcgatgggattacaggatgttctttacttaggaaaccta
gatgcacaaagagattgggggcatgctaaagattatgtagaaggaatgtggctgatgttg
cagcaagaacagccagaagattttgtattggcaactggagttactacttatatccgtgat
tttgttagaatggctttcgctgaagtaggagttaccctggcatttagtggagagggagtg
aatgaaataggtacaattgcggctattgaaaatgtgcaacactcatctatgaaagtagga
caggttgtggtaaaagtagaccctcgttattacagacctactgaagttgatttattaatt
ggagatgcaaccaaggctaagaagaaattaaactggtcgcctaaatatactttagctgaa
atggtaaaagagatggtggcggcagatattgtattgtttaaaaaagaacagttgttgaaa
gacaatggatttgcaacagaaaaggaacatgaataa
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