Sediminibacterium planctonicum: TEGAF0_22940
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Entry
TEGAF0_22940 CDS
T08564
Name
(GenBank) RND transporter
KO
K02005
HlyD family secretion protein
Organism
sedt
Sediminibacterium planctonicum
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
TEGAF0_22940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
BSH_CusB
Beta-barrel_AprE
RND-MFP_C
HH_MFP_RND
BSH_CzcB
HH_EMRA
Beta-barrel_YknX
BSH_YknX
Biotin_lipoyl
YknX_C
HH_CzcB
HH_AprE
Beta-barrel_RND_2
CzcB_C
HH_YBHG
OEP
PYNP_C
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
BDQ13077
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Position
2588417..2589796
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AA seq
459 aa
AA seq
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MSKKLIWIIVGLVVTIGVIIGLKKAGVIGKEEGIKVTVEAVQRRTIIETVNASGKVYPEI
EVKISPDVSGEIVELTVAEGDTVKRGQVLARIYADILNSQRDQVAAGVSQQMAQVSNTTA
QSAAIKATLDQAEIQYNRQKKLLEEKVISRLEFEQADQAVKTARANYNAAMEGIKSAKAG
VQSVQAQLNRANKDIGRTLITSPMDGVISLLAIKKGERVAGNSFNVGTEMMRVADMRSFE
VRVDVGENDIPKVKIGDTAIVEVDAYTSRKFKGIVYKIANPSTGNTLAANATAEVTNYKV
HIRLLPESYNDLVVPGRSFPFRPGMTASADIQTRSKYNVLSVPLNAVTTRDAKEDQKEKK
EEKKSDGKVAQVEKTEQKSVTSDDTIEEVVFVLQADNKVKKVKVKTAIQDLNNIEVTEGL
KEGDKVITGPYSIVSKMLKDGNLVTVVEKDKLFEEKKKD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaagttaatctggattattgtaggactggtggtaacgattggagttatcatt
ggactgaagaaagcaggagttataggaaaggaagagggcattaaagtaactgtggaagct
gttcagcgtagaacaattattgaaactgtgaatgccagcggaaaggtatatcctgaaatt
gaagtaaaaattagccctgacgtgagtggggaaattgtagaattaacagttgcagaaggc
gatacagtaaagcgtggtcaggtgctggcaagaatttatgcagatatcctgaactctcag
agagaccaggtagctgcaggagtaagtcagcaaatggctcaggtgtctaatacaacagct
cagtctgcggctattaaagccacattagatcaggccgaaattcaatacaatcgtcagaaa
aaattattagaagaaaaagtaatcagccgtctggaatttgagcaggctgatcaggcagta
aaaactgcacgtgccaattataatgctgcaatggaaggcattaaaagtgctaaagcaggg
gttcagagtgtgcaggcacaattaaacagggccaataaagatatcggtagaactttgatt
acttctccaatggatggtgttatcagtttacttgctattaaaaaaggagagcgtgtagct
ggtaatagctttaacgtaggtactgaaatgatgcgtgttgccgatatgcgcagttttgaa
gttcgggttgatgttggtgaaaatgatattccgaaagtaaagattggagataccgcaatt
gttgaagtggatgcatatacctccagaaaatttaaaggtattgtgtataaaattgccaac
cctagtacaggtaataccttggctgcaaatgctactgcagaagttaccaattataaagta
catatccgtttattgcctgaaagctacaatgaccttgtagttcctggccgttctttccct
ttccgtccaggtatgacagccagtgcggatattcagaccagaagcaaatacaacgttttg
tctgttcctttgaatgcagttacaaccagagatgctaaggaagatcagaaagaaaagaaa
gaggagaaaaagtctgatggtaaagttgctcaagtagaaaagacagagcagaaatcagtt
acttctgatgatacaattgaagaagtggtatttgtgttgcaagcggataacaaagtgaag
aaagtgaaagtgaaaactgccattcaagatctgaataatattgaagtaacagagggctta
aaagaaggagacaaagtaattaccggtccttattctatcgtaagcaaaatgctaaaggat
ggcaatttggtaactgtggttgagaaggataaattatttgaagagaagaaaaaagactaa
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