Sediminibacterium sp. TEGAF015: TEGAF0_23370
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Entry
TEGAF0_23370 CDS
T08564
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt03030
DNA replication
sedt03430
Mismatch repair
sedt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TEGAF0_23370
03430 Mismatch repair
TEGAF0_23370
03440 Homologous recombination
TEGAF0_23370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedt03032
]
TEGAF0_23370
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_23370
Enzymes [BR:
sedt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TEGAF0_23370
DNA replication proteins [BR:
sedt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TEGAF0_23370
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TEGAF0_23370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
RCF1-5-like_lid
AAA_30
Rad17
AAA_24
AAA_18
AAA_2
AAA_14
AAA_19
AAA_7
PPR_long
AAA_16
Mg_chelatase
RNA_helicase
nSTAND3
Mre11_C
PIF1
AAA_assoc_2
DNA_pol3_delta_C
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDQ13120
LinkDB
All DBs
Position
2641911..2643731
Genome browser
AA seq
606 aa
AA seq
DB search
MENFVVSARKYRPQNFNTVVGQQHITTTLKNAIRNQQLAHAFLFCGPRGVGKTTCARILA
KTINCTNPTSEGEACNTCSSCVSFDAGTSMNIHELDAASNNSVDDIRALVEQVRFAPQAG
KYKVYIVDEVHMLSSSAFNAFLKTLEEPPPFAIFILATTEKHKILPTILSRCQIFDFKRI
TNNDTVEHLQEIATKEHINAEKAALQVIAQKSEGCMRDSLSILDKIVSFTNGTVTYQNTL
EHLNILDEDYFFQLLDCMQQQDMAGAMLLYDQINRKGFEGDLVLNGFAEFIRNLLVCKDA
KSASLLEVVEGMQQKYEQVAAHTSLSYLVSALNILNDTEVNYKMARNKRLHVELALIKLS
FLQQAIELSQDKSGVSKKKRVDGPIAFRARPIQSLVPPVPTNTASTAGNAKISSGTEASA
TSQQSAQINQAPSAKLYVEQTAPAVTPPPGTLKTGPKKSLLEALKEKAGAAYEIEEVKEA
KPLTEETLRSFWESYIKQLEQQLKHSAVGTFKIASLEIDNDIHFTVRVSAVTAQKFIESE
KLVLLEQLHAQFNNRAINFTILVEEGEKEDVPLHMRLNSKQRFERIAEQYPLVKELRDRL
RLEIDY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttgtagtatcagcccgtaaataccgtcctcagaactttaatacagttgtg
gggcagcaacatattaccaccaccttgaagaatgccattcgcaatcagcaactggcacac
gcctttttgttctgtgggccacgtggtgtaggtaaaaccacatgtgccagaattttggcg
aagacaatcaactgtaccaatccaacatcggaaggcgaagcttgtaatacttgcagtagc
tgtgtttcctttgatgcaggtacttccatgaatattcatgaactggatgcggccagtaat
aactcagtagacgatatcagggcgctagtagaacaggtgcgttttgctccgcaagctggt
aagtacaaggtatatattgtggacgaggtacatatgttaagttccagtgccttcaatgca
tttttgaaaaccttagaagagccgccaccttttgccatatttattttagcaactaccgag
aagcacaaaattctacctaccattttaagtcgatgtcaaatcttcgattttaaaagaatc
acaaataatgatacggtagaacatttacaagaaatagctaccaaggaacatatcaatgct
gaaaaagcagcattacaagtgattgcacaaaagagcgaaggctgtatgcgtgattcctta
agtattctagataagattgtcagttttaccaatggaacagtaacgtatcagaatacactg
gagcacctgaatattttagatgaagattatttcttccaattgttggattgtatgcagcaa
caggatatggcgggagctatgttgctgtatgatcagatcaatcgtaaaggatttgaaggg
gatcttgtattgaatgggtttgcggaatttattcgcaacctgttggtttgtaaagacgct
aaatccgcttctttgctagaagtagtagaagggatgcaacaaaaatacgagcaggtagca
gcacatacttccttgagttatctggtgagtgcgctgaatattctgaacgatacagaggtt
aactataaaatggcgcgtaacaaaagattgcatgttgaactcgcgttaatcaaacttagt
tttttacaacaagcgattgaattgagccaggacaaatcgggggtatcaaaaaaaaaacgg
gttgatggtcctatagcttttagagccagacctattcaatctctggtaccaccagttcct
acgaatacggcatccactgccggtaatgcaaaaatttcttcaggaactgaagcttcagca
acaagccagcaatcggcccaaatcaatcaggctccttctgctaaattgtatgttgagcag
acagcacctgctgtgactcctccgccaggcacattaaagacgggtccaaaaaaatctttg
cttgaagcattaaaagaaaaagcaggtgcagcatatgagattgaagaagtaaaggaagcg
aagcctcttacagaagagacattgcgctccttctgggaatcttatattaaacaactggag
caacaattgaaacactctgcagttggtacattcaagattgccagtttagaaatcgataac
gatattcattttactgtaagggtatctgctgtaactgcacagaaatttattgagtctgag
aagttggtcttattagagcagttgcatgctcagtttaataatcgtgctatcaattttact
atactggtagaagaaggtgaaaaagaagatgttccattgcatatgcgcctcaatagcaaa
caaagatttgagcgcattgcagaacagtacccattggtgaaagaacttcgcgacaggctg
cgtttagaaattgactattga
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