Sediminibacterium sp. TEGAF015: TEGAF0_23860
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Entry
TEGAF0_23860 CDS
T08564
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sedt03009
]
TEGAF0_23860
Enzymes [BR:
sedt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TEGAF0_23860
Ribosome biogenesis [BR:
sedt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TEGAF0_23860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF6831
Motif
Other DBs
NCBI-ProteinID:
BDQ13169
LinkDB
All DBs
Position
complement(2694483..2695658)
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AA seq
391 aa
AA seq
DB search
MQKRTDNFSKFAEKKKGAAIKEAIRQEKRKIKAEARAVGEEMRAKKKAQARGEVYSGPKQ
TEASDKFASRTSKTVKENSRNTTNSHNRFSENKADRPASGSYKAFKEGKTGDKKFSKDKG
AKPSYPGNPRDADYKAKAVGSEPMPLNKFIAHAGVCGRREAAELVKDGKVTVNGDKVFEP
GYKVSQSDKIVVKGKSVFLQKNLVYLLLNKPKDFITTANDPQGRKTVLDLIKGATPERVY
PVGRLDRNTTGVLLLTNDGELAQKLTHPSFEVKKIYEVTLDKPVTKKDLDQIASGVTLED
GFVAADSVGYADPKTKNVVGIEIHSGRNRIVRRIFEHLGYDVKALDRVMFANLTKKNVER
SKWRFLNEKEVRLLKFMNKSFVRKNKTENPA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaagaacagacaacttcagcaaatttgctgaaaagaaaaaaggggcagctata
aaagaagccattcgtcaggaaaaaaggaaaatcaaggcagaagccagagcagtcggcgaa
gaaatgagagcaaagaaaaaagctcaggcccgcggcgaagtttacagtggccccaagcaa
acggaagcttcagataaatttgctagccgtaccagtaaaactgtgaaggaaaatagtaga
aatacaacaaacagccataaccgtttttcggaaaacaaagcagatagacccgccagcgga
tcctataaagcttttaaagaagggaaaactggcgataaaaaattttcaaaagataaaggg
gcaaaaccaagctatcctggcaatcccagagatgcagattataaagccaaagcagttggt
agtgagccaatgccattgaataaattcattgcgcatgccggtgtgtgtggaagaagagaa
gcagcagaattggtaaaagatggcaaagtaacagttaatggcgacaaggtttttgaacct
ggctataaagtttcgcagtctgataaaattgtagtgaaaggcaagtccgtttttctacaa
aaaaacctggtgtatctgttgttaaacaaacccaaggattttattaccacagcgaatgat
cctcagggaagaaaaacggtgttggatttaataaaaggcgccacacctgaaagagtatat
ccggttggaagattggacagaaacactactggtgttttattgttgaccaatgatggagaa
cttgcacagaagctaacacatccttcttttgaggttaagaagatttatgaagtaacgctt
gacaaaccggttactaaaaaagacctagatcagatagccagtggggttacgctagaagac
ggatttgttgcggcagactcagtaggatatgcagatcccaaaacaaaaaatgttgttggc
attgaaatacacagtggcagaaacagaattgtacgtagaatatttgaacaccttggctat
gatgtaaaagcgcttgacagggttatgtttgccaaccttaccaagaaaaatgtagaaaga
agcaaatggcgttttctgaatgagaaagaagttcgtttgctgaagttcatgaacaaatca
tttgtaagaaaaaacaagaccgagaatcccgcatga
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