Sediminibacterium sp. TEGAF015: TEGAF0_24670
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Entry
TEGAF0_24670 CDS
T08564
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt00300
Lysine biosynthesis
sedt00470
D-Amino acid metabolism
sedt00550
Peptidoglycan biosynthesis
sedt01100
Metabolic pathways
sedt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TEGAF0_24670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TEGAF0_24670
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TEGAF0_24670
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TEGAF0_24670
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedt01011
]
TEGAF0_24670
Enzymes [BR:
sedt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
TEGAF0_24670
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
TEGAF0_24670
Peptidoglycan biosynthesis and degradation proteins [BR:
sedt01011
]
Precursor biosynthesis
Amino acid ligase
TEGAF0_24670
Racemase
TEGAF0_24670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BDQ13250
LinkDB
All DBs
Position
2799298..2801772
Genome browser
AA seq
824 aa
AA seq
DB search
MPYCLGDIAAILQQNISANAALPVEYLVTDSRNIIDPAKSIFFAIKGPRRSGISFVNEAY
QQGVRIFIIEEPIDASLYTDAVFIQVPNVIAALQQIAAHHRKQFAIPVIGITGSNGKTIV
KEWLYQLLQSDYHIVRSPRSYNSQIGVPLSVWQMNAQHTLAIFEVGISAKGEMQALANIV
QPTIGVFTNLGEAHNQGFDHPTQKLEEKSKLFQHTPLIVTAADYMPASFLQHKGVVAWGS
KPQLINGHSIPQLLVVKQEKRQTETIVSLQFRTESFELSLPFTDEVSVQNALTCVLVLLQ
LGYAFPVIQQRVKQLQPVEMRMQLKRAINQSYVLNDSYSNDKVSLSLALQFLKEQAGNQP
IVAILSDIVESGESQEQLYNHVVQQLQNAGVKELYAVGPQMCNYFKEAQFPFKVYCFEQT
SNLLEALNESHFQQQYILLKGARKFAFEQVAHWLEQQVHQTIMEINLTAMVHNLKEYQSL
LKPQTKMMAMVKAFGYGSGAGEVARRLQQQQVDYLSVAYADEGVTLRKAGIHLPIMVMSA
DEYSFDAMVNYSLEPELFSFPILEAFHQYIAQQGLPQYPIHLKINTGMNRLGFDMGEIDK
LCNWLQHQKLLRVKSVLSHLAASEDKKEDAFTQHQVDLFTEASNKIEKALGYPVVKHIAN
TAAIRRNPNWQFNMVRLGIGLYGADNVQDKELSLQTVATLKTTVAQVRHLKAGETVSYNR
SGVLTRDSIIATVRIGYADGYSRRMGNGNGKMYVRGGIAPTVGKICMDMCMIDVTDIPGV
KAGDPVEIFGKHISIQEVAKAADTIAYEIMTGISLRVKRVYIEE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgccttactgtctgggtgatatcgccgctattttacagcagaacatttcagcgaatgct
gccctgcccgtagaatacctggtaaccgatagcagaaatattattgatcctgcaaagagt
attttctttgccatcaaaggtccgcgccgttccggaatcagttttgtaaacgaagcctat
cagcagggggtacgcattttcattattgaagagcctattgatgcatcattgtatacagat
gcagtttttatacaagtacccaatgtaattgcggcactgcagcaaattgcagcccatcac
agaaagcagtttgccattccggtcataggcattaccggcagcaatggaaagaccattgta
aaggaatggttgtatcagttattgcaatccgattatcatattgtaagaagcccacggagt
tataattctcagataggtgtgccgttgagtgtatggcaaatgaatgcacaacatacactg
gccatttttgaagtaggtatttctgcaaaaggagaaatgcaggcattggccaatattgtt
cagccaactataggtgtattcaccaatttaggagaagcccataatcagggatttgatcat
ccaactcagaagctggaagaaaaatccaaactatttcagcatacccctttgatagtcaca
gcggctgattatatgcctgcttcttttttgcaacacaaaggagtagttgcgtggggatca
aaaccgcagctaatcaatggccactctattccgcaactattggtagtaaagcaggagaag
cggcagacggagaccatcgtttcgcttcaattcagaacagaaagttttgaactgtctttg
ccattcacagatgaagtttccgttcagaatgcactcacatgcgtattggtcctattgcag
ctgggctatgcgtttcctgttattcaacagagagtaaaacaattgcagccggtagaaatg
cgtatgcagttaaagcgtgccatcaatcagagttatgtattgaacgatagttacagtaac
gataaagtatctctatccttagcgctacagttcttaaaagagcaggcaggaaatcaaccc
attgtagccatcctctctgatattgtagagtcgggtgaatcgcaggagcagttatataat
catgtggtacagcaattgcagaatgcgggtgtaaaagaattgtatgcagtgggtccgcaa
atgtgcaattattttaaggaagcgcaattcccattcaaagtttactgctttgaacaaacc
agcaatttgctggaagccttgaatgaatcgcatttccagcaacaatatattttactgaag
ggcgcaagaaaatttgcctttgagcaggtagcgcattggttggaacagcaggtgcaccag
accatcatggagatcaatctcaccgccatggtgcacaatttaaaagaataccaatcactg
ctgaagcctcagaccaaaatgatggccatggtaaaagcttttggctatggcagcggggca
ggcgaagtggccagaagattgcaacagcagcaggtagattatttatcggttgcttatgca
gacgaaggggtaacgcttagaaaagcgggtatccatttgcctattatggtcatgagtgcc
gatgagtattcttttgatgccatggtgaattattcactggaacctgaattattttccttc
cctattttagaagcatttcatcagtatatagcacagcagggtttgccacaatatcccatt
catctcaaaatcaatacgggaatgaaccggctgggttttgatatgggagaaatagacaag
ctatgcaattggttacaacatcaaaaattactgcgggtaaaatctgtgttgagtcatctg
gcggcaagcgaagacaaaaaggaagacgcttttacacagcaccaggtagatctttttaca
gaagcaagtaataaaattgaaaaagcattgggatatccggttgttaaacatattgccaat
acagcagctattcgccgaaatcccaattggcagtttaatatggtgagactgggcatagga
ttatatggtgccgataatgtgcaggacaaagaactttccttacaaaccgtagccacttta
aaaacaaccgttgcacaggtaagacacctgaaagcaggagagacggttagctacaatcgc
tcgggtgtattaacaagggatagcatcattgcaacggttagaattggatatgcggatggt
tattccagaagaatgggaaacgggaatggaaaaatgtacgtacgcggaggtatagccccc
accgttggtaaaatctgtatggacatgtgtatgatagatgtaacagatatacccggtgta
aaagcaggagaccccgttgaaatttttggaaaacatatatccattcaggaagtggccaaa
gcagctgataccattgcttatgaaatcatgacaggcattagcttacgggtgaaacgcgtt
tacatagaggagtag
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