Sediminibacterium sp. TEGAF015: TEGAF0_26790
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Entry
TEGAF0_26790 CDS
T08564
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sedt
Sediminibacterium sp. TEGAF015
Pathway
sedt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TEGAF0_26790 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedt03400
]
TEGAF0_26790 (ruvA)
DNA repair and recombination proteins [BR:
sedt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TEGAF0_26790 (ruvA)
RecFOR pathway proteins
TEGAF0_26790 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
5_3_exonuc
UBA_7
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDQ13462
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All DBs
Position
3040450..3041034
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AA seq
194 aa
AA seq
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MIAFVRGHFAVKTPARVVVDVNGVGYDLQISLNTFSAISNQESGQLFTYLHITENAHTLF
GFADLAEKDLFLQLISVSGVGASTARMMLSGMKPEEITRAIVQGNTKQLEGIKGIGKKSA
ERLIVELRDKLAKQHNENILPGFVTPQMDSDAINALISLGIGRVMAEQAVKKTMQTTPES
SSLEEIIKQALKNL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgatagcatttgtaagaggtcattttgcagttaaaaccccagcccgcgtagtagtagac
gtgaatggggtaggttatgatcttcagatcagcctgaatactttctctgctatcagcaat
caggagagcggccagctctttacctatctgcatattaccgaaaatgcccatacacttttt
ggttttgccgacctggccgaaaaagacttgtttttgcaactgattagtgtttcaggcgtt
ggtgcttctactgcaagaatgatgctatcgggtatgaagcccgaagaaattacccgtgcc
attgtgcagggcaataccaaacagctggaaggcatcaaaggaattggtaaaaaatcggca
gaaagactgattgtagagctgcgcgataaactggctaaacagcataatgaaaatatttta
cccggatttgttacccctcaaatggattcggatgcaataaatgccttaatttcattaggc
attggaagagtgatggcagaacaagccgttaaaaagaccatgcaaaccacccccgaaagc
agttcattagaagaaattattaaacaagcactcaaaaacctctag
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