Sedimentibacter sp. zth1: JYG23_00350
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Entry
JYG23_00350 CDS
T07110
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
sedz
Sedimentibacter sp. zth1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
CBS
HTH_8
PAS_9
AAA_2
PAS
Mg_chelatase
PAS_4
dCache_1
AAA_5
AAA
PAS_8
AAA_7
IstB_IS21
PAS_7
Diguanyl_cycl_sensor
AAA_3
HTH_30
AAA_16
HTH_28
PUA_2
Motif
Other DBs
NCBI-ProteinID:
QSX05953
UniProt:
A0A974XA02
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Position
71128..72906
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AA seq
592 aa
AA seq
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MSIKLKYKVYEIMDTDFLKIYYKETIKEAIKKLMFSKRDEIVLVNEDDVIVGIFTKTDIY
KMRNSKESEFERPAFDFSVNDIVKVNYDENVILAKDIMIQKNLGRLFVEKDEKIVGIITN
NNIRDRFYAKVEDLHIMTEEAFDNICEAVCICDSNGEVIYWNKASEKLYNLKKDKIIGAN
IANYFPNALTSKVFKEQKAYKYVLHQPVKGKEVFLSAVPIFNKNNQMTAVITTDKDINEL
DKLMDKLKREEEKSKYYEVRYKEQIKKQYSFSTIISKNKKVIEAIALSQRISTSNANIMI
TGESGTGKDVFARAIHDSSGRKGKLVALNCSAIPEELLESELFGYEEGAFTGAVKGGKIG
KFELANNGTLFLDEIGEMPIKMQSKLLRVLQDGIINRLGSDKSIKTNVRIISATNIDIKS
AIENDKFRNDLYYRLAVVNIELPPLRERKDDIRELTKYFIKEFSEKENISIDSFDDEIYD
IFSEYCWEGNIRELRNVVQRIVILSNDGIIKKEDIPEYILIYKSNTNISTMIENLENDLD
FDDNIKKIEIKMLKEAINISKGNRSKAAKLLKINRTTFYYKIKQYGLEKLLD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaactaaagtataaagtttatgaaataatggatacagattttcttaaaata
tattataaagaaactattaaagaagcaattaagaaattaatgttttctaaaagggatgaa
attgttttagtaaatgaagatgatgtaattgttggaatatttactaaaacagatatatat
aaaatgagaaattcaaaagaaagcgaatttgaaaggcctgcttttgatttttctgtcaat
gacatagtaaaagtgaattatgatgaaaatgttatacttgctaaagatataatgatacaa
aaaaatcttggaagattatttgttgaaaaagatgaaaaaatagttggaataataaccaat
aataatattagagatagattttatgctaaagttgaagatttgcatataatgacagaagaa
gcatttgataacatttgtgaagctgtatgtatatgcgattctaatggtgaagttatatat
tggaataaagcatcagaaaaattatataacctaaaaaaagataaaataattggtgcaaat
atagctaattattttcctaatgctttgacaagtaaggtttttaaagaacaaaaagcttat
aagtacgtattacatcaacctgttaaagggaaagaggtatttttaagtgctgttcctata
tttaataaaaataatcaaatgactgctgttattactactgataaggatataaacgaatta
gacaaattgatggataaacttaaaagagaagaagaaaagtctaaatattatgaagtaaga
tataaggaacaaataaaaaagcagtatagtttttcaacaataatcagtaaaaataaaaaa
gttattgaagcgatagctttatcacaacgtatttcaactagtaatgcaaatataatgatt
actggagaaagcggtacaggaaaagatgtttttgcacgtgcaatccacgattctagcgga
agaaaaggtaaattagtagcactaaattgtagcgctatacctgaggaactgttagaaagc
gagttgtttggttatgaagaaggagcatttactggcgcagttaaaggtggtaaaatagga
aaatttgaattagcaaacaacggtacgctttttttagatgaaataggtgaaatgcctata
aagatgcaaagcaagctgttaagagttttacaagatggcataatcaatagattaggtagc
gataaatctattaaaactaatgttagaataatatccgctacaaatattgatataaaaagt
gctatagaaaatgataaatttagaaatgatttgtactatagattggctgtagtaaatatt
gaattaccgccacttagagaaagaaaagatgacataagagaattaactaaatattttata
aaggagttttcggaaaaagaaaacatatcaattgatagctttgatgatgaaatttatgat
atatttagtgaatattgttgggagggtaacataagagaacttcgaaacgttgtacaaaga
atagttatactttcaaatgatggtatcataaaaaaagaagatataccagaatatatactt
atatataaatcaaatacaaatataagtacaatgatagaaaatcttgaaaatgatttggat
tttgacgataatataaaaaaaatagaaataaagatgttaaaagaagcaataaacatatct
aagggcaacaggtccaaagctgctaaattgttaaaaataaacagaactactttttattac
aagataaaacaatatggacttgagaaactgttagattaa
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