Sedimentibacter sp. zth1: JYG23_00905
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Entry
JYG23_00905 CDS
T07110
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sedz03000
]
JYG23_00905
Transcription factors [BR:
sedz03000
]
Prokaryotic type
Helix-turn-helix
Other families
JYG23_00905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
AAA_16
AAA_3
AAA_PrkA
HTH_30
AAA
Bac_DnaA
PAS_4
HTH_50
PAS
GAF_PdtaS
Motif
Other DBs
NCBI-ProteinID:
QSX06059
UniProt:
A0A974XA70
LinkDB
All DBs
Position
173698..175089
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AA seq
463 aa
AA seq
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MKSKDYVSIMQNILHLVDDGVHVIDKNCNSIIYNEFMANLEKMDVKDVLNKPFTQVFKNL
DENDSTLLKALHHNKSTIKKIQTYSNKDGKEITTINTTIPIFSGDDVIAAIEVSKNITEI
KEMSNTILDLRKEIVQPSEVKNSKIRKYRFRNLIGKSSNFKQIIDIAKKASKSSASVFIY
GETGTGKELIAQSIHFDGIRQNKPFLAQNCAALPESLLEGILFGTSKGGFTGAIDRVGLF
EQANGGTLLLDEINSMPYELQAKLLRVLQENYIRRVGGTRDIPIDVRIIATVNEKADSLI
KQGKLRKDLYYRINIIPINVPPLRERKEDILLLADRFIDKYNSRYNKNIWMLSENAKEKL
MKYEYPGNVRELENIIMGAMSMIDDENVISDKHILIDDVNNKTSNKHDFYDIGVTQYLED
IEKEIIINTMRIYKNNISKTAEHLKIKRQTLQHKLKKYSILDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaggattacgtatcaatcatgcaaaatattttgcaccttgtagatgatggt
gttcatgtaattgataaaaattgtaatagtattatatataatgaatttatggctaattta
gagaaaatggacgtaaaggatgtattaaataaaccatttacacaagtttttaagaattta
gatgaaaatgatagcacactacttaaggcattacatcataataaaagtaccataaaaaaa
attcaaacatattcaaataaggatggtaaggaaattacgacaatcaatacaactattccg
atatttagtggagatgatgttattgcagcaattgaggtttctaagaacatcacagaaatt
aaagaaatgtcaaatacaattttagatcttaggaaagaaatagtacaaccaagtgaagtt
aaaaattcaaaaattagaaaatatagatttagaaatttaattgggaaaagtagcaatttt
aagcaaattattgatattgccaaaaaagcctctaaaagtagtgcttcagtttttatttat
ggtgaaacgggtacaggtaaggagcttatagcacaaagtattcactttgatggaattagg
caaaacaaaccatttttagcacagaattgtgctgcattgcccgaaagcttgctagagggc
attttatttggaacttcaaagggaggttttactggtgctattgatagggttggacttttt
gaacaagctaatggaggaacattattgcttgacgagattaattcaatgccatatgagctt
caagcaaaacttttaagagtattgcaggaaaattatattagacgtgttggaggaacaagg
gatattccaatcgatgtaagaattatagctacagttaatgaaaaagctgattctttaata
aaacaaggaaaattaagaaaagatttatattatagaattaatattattcctattaatgtt
ccacctcttagagaaagaaaagaagatattttgctgcttgctgatagatttattgataag
tataatagtaggtataataaaaatatttggatgttatcagaaaatgcaaaagaaaagcta
atgaaatatgaatatccaggcaatgtaagagaacttgaaaatatcataatgggtgctatg
tcaatgattgatgatgaaaatgttattagtgataagcatattttgatagatgatgttaat
aataagactagtaataaacatgatttttatgatattggagttacacaatatttagaggat
atagaaaaagaaataataatcaatacgatgagaatatataaaaataatataagtaaaact
gcagaacatttaaaaattaaaagacaaacattacagcacaaattaaaaaaatacagtatt
ttagataaatag
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