Sedimentibacter sp. zth1: JYG23_00940
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Entry
JYG23_00940 CDS
T07110
Name
(GenBank) alanine/ornithine racemase family PLP-dependent enzyme
KO
K21898
ornithine racemase [EC:
5.1.1.12
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00470
D-Amino acid metabolism
sedz01100
Metabolic pathways
sedz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYG23_00940
09110 Biosynthesis of other secondary metabolites
00975 Biosynthesis of various siderophores
JYG23_00940
Enzymes [BR:
sedz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.12 ornithine racemase
JYG23_00940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ala_racemase_N
DUF1040
Motif
Other DBs
NCBI-ProteinID:
QSX06065
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All DBs
Position
182217..183290
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AA seq
357 aa
AA seq
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MYPRLLIDLNKIEHNLEIITDKVTNAGCSIMIVTKVVCADEKIARIVDKNEKVEFFADSR
IENLESYQYSNKQKVLLRLPMISDVERVVKYSDISLNSELEIIKCLNIEAKKQNKTHKII
LMIDLGDLREGLYYTDKKEIFRTVEEIIKLESIELYGLGVNLSCYGAVIPQVDNLNVLVG
IAQEIEDKFNMKFKMISGGNSSSLYLIDKKLLPRGISNLRIGEAFFLANETAYSNKIENM
HDDTLILQAEIIELKEKPSIPVGEIGVDAFGKKPHYEDRGIIKRAILAIGKQDIDIESIV
PLDCDIDVLGASSDHMILDVSKSKTQYKLGDIISFKLGYMGTLRAFTSKYIDKQYID
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaagattattgattgacttaaataaaatcgagcataatcttgaaattataaca
gataaggtcacaaatgccggttgttcaattatgatagttacaaaggttgtatgtgcagat
gaaaagatagcaagaattgtagataaaaacgaaaaggtagaattttttgctgattcaaga
atagaaaatttagagagctatcaatatagcaataagcaaaaagttttgcttaggcttcca
atgataagtgatgttgaaagagttgtaaaatattctgatatcagtttaaattcagagctt
gagataataaaatgtttgaatatcgaagctaaaaaacaaaacaaaactcacaagattatc
ttgatgatagatttaggagatttgagagaaggcttatattatacagataaaaaagaaata
tttagaactgtagaagaaataataaaacttgaaagcattgaattatatggcttaggggta
aacctttcttgttatggtgcggtaattccacaagttgataatttaaatgttttagttggt
attgctcaagaaatcgaagataaattcaatatgaaatttaaaatgatttcaggtggaaat
tcaagttccttgtatttaattgacaagaaattattgcctagaggtataagtaatttaaga
attggagaggctttctttttagcaaacgaaacagcttattcaaataaaattgaaaatatg
catgatgatacgttaattcttcaagcggaaattattgagctaaaagaaaaaccttctatt
ccagttggtgaaataggtgttgacgcatttggtaaaaagccacattatgaagatagagga
ataattaaaagagcgatacttgcaattggaaagcaagacatagatatagaaagtattgtt
ccacttgattgtgatatagacgttttaggtgcaagctcagaccatatgatattggatgta
tccaagtctaaaactcaatataagcttggtgatattattagctttaaattaggttatatg
ggtacactaagagctttcacgagtaagtacattgataaacaatatatagattaa
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