Sedimentibacter sp. zth1: JYG23_01390
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Entry
JYG23_01390 CDS
T07110
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00550
Peptidoglycan biosynthesis
sedz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYG23_01390
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
JYG23_01390
Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JYG23_01390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
DUF7181
Motif
Other DBs
NCBI-ProteinID:
QSX06147
UniProt:
A0A974XAC0
LinkDB
All DBs
Position
283950..286082
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AA seq
710 aa
AA seq
DB search
MKFKNDGTANLQNKRRMLVFLLVFFAITLALIAKLGYIQLVKGNEYKKGAYEQWSKDVVI
NAKRGTIYDSKGKKLAVSVNANTVVCYPQDVRKGSSDRLTIEEETNDDEGNFITNFFNNL
NKKITKGKQEELLQAQLEDLKSLDEIAQTLSEILEMDKDAVYKKITEKSKYNLLKKWITK
EQVEKIREANIIGISIIDDNKRVYPYGNFAPYILGFTDIDQHGLYGVEATFDSYLTGVPG
RVVVNTDGKGRDLPYGYNEYFESEDGYGIVLTIDETIQHFADKAAEEALANTQSKRVNIV
LMEPETGDIIAMASKPDYDPNNPKENINPEIQKQWDNLPQDELIQNWYDMWRNSIVNDIY
EPGSTFKPLVVAIALQENKTSPERTYFCDGYARQIKSANIKCWRYYNPHGQQTLAEVLQH
SCNDAMVEIGLDIGAETFYNYLRALGFGEKSGIMLNGEEIGIVNHYKYMKDVNVATQSFG
QGVSVTPLQLVTAISCLANDGNLMEPRIVKQLIDSEGNIIKNYEPVMRRNVFTEEVANMV
IDMMGTVVEKGGAKAAAISGYRVGGKTGTAQKAIPGGYAPAGTYISSFVGVAPTDDPKVV
CLMTLDEPQGTYYGSIIAAPVVGQLIEETLKYMEIEPKYSEQEIGAMKAASIEVPDVTNM
TIAEASKTLQKLKLQHNVTIDVEEDAIVKDQFPQPGTKVTKNSIITLILN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaagaatgatggtactgctaatttgcaaaacaaaagaagaatgctagttttt
ttactagttttttttgctataacacttgccttgattgctaagttaggctatatacaatta
gtaaaaggtaatgaatacaaaaaaggtgcttatgaacaatggtccaaggacgttgtaatt
aatgccaaacgtggaactatatatgattcaaaaggtaaaaaactcgctgttagtgttaac
gcaaatacagttgtttgttatcctcaagatgttagaaaaggttcatcagatagacttaca
atagaagaagaaacaaacgatgatgaaggtaattttataactaattttttcaacaattta
aataaaaaaattactaagggtaaacaagaagaattactccaagcccaattagaagatttg
aagtcactggatgaaatagctcaaacattatctgaaatattggaaatggataaagatgct
gtttataaaaaaataacagaaaaaagtaagtataatttgcttaaaaagtggattaccaaa
gaacaagttgaaaaaattagagaagcaaatataataggcattagcataattgatgataat
aaaagagtatatccttatggcaattttgcaccttatatattagggtttactgacatagac
caacacggattatatggggtagaagcaacatttgatagctatttaacaggtgtacctgga
agagtagtagtaaatactgatggtaagggtagagatcttccatatggttataatgaatat
tttgaatctgaagatggatatggaatagttttaacaattgatgaaactattcagcacttt
gctgataaagctgcagaagaagcacttgccaatactcagagtaaaagagtaaacatagtt
ttaatggaacctgagacaggcgatataattgctatggcaagcaaaccagattatgatcct
aataatccgaaagaaaatataaatccagaaatacaaaaacagtgggataacctaccacaa
gatgagcttatacaaaattggtatgatatgtggagaaattcgatagttaatgatatatat
gagcctggttctacatttaaaccactggttgttgcaatagcacttcaggaaaataaaaca
tcaccagaaagaacgtatttttgtgatggttatgctagacaaattaaaagtgctaatata
aaatgttggagatattataatccacatggacaacaaacattagcggaggttttacaacat
tcttgcaatgatgctatggtggaaataggattagatattggagcagaaactttctacaat
tacttaagagcattagggtttggtgaaaaatcaggtataatgcttaatggtgaggaaata
ggtattgtaaatcattataaatatatgaaagacgttaatgtggctactcaatcattcggt
caaggtgtttcagttacaccgctgcagttagtaacagctatatcttgtttggctaatgat
ggaaatcttatggagccaagaattgttaaacaattgatagatagtgaaggaaatattata
aaaaactatgaaccagttatgagacgaaatgttttcaccgaggaagtagctaatatggtt
atagatatgatgggaacagttgttgaaaaaggtggagcaaaggcagcagctatatcaggt
tatagggttggtggaaaaactggtacagcacagaaagctattcctggtggatatgctccc
gccggaacatacataagttcttttgttggtgttgcacctaccgatgatccaaaggttgta
tgcttaatgactttagatgagcctcaaggaacatattatggcagtattatagctgctcca
gttgtaggtcaactaatcgaagaaacactgaaatatatggaaatcgaaccgaaatattca
gaacaggaaataggtgctatgaaagctgcatctattgaagtcccagatgttacaaatatg
acaatagcagaagcaagtaaaacattgcaaaagttaaaattacaacacaatgtcactatt
gatgttgaggaagatgcaatagtaaaagaccagtttccacaacctggtacaaaagtaacg
aaaaattcaattataacgctaatattaaattaa
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