Sedimentibacter sp. zth1: JYG23_01530
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Entry
JYG23_01530 CDS
T07110
Name
(GenBank) GHKL domain-containing protein
KO
K07706
two-component system, LytTR family, sensor histidine kinase AgrC [EC:
2.7.13.3
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz02020
Two-component system
sedz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYG23_01530
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYG23_01530
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sedz01001
]
JYG23_01530
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sedz02022
]
JYG23_01530
Enzymes [BR:
sedz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JYG23_01530
Protein kinases [BR:
sedz01001
]
Histidine kinases
LytTR family [OT]
JYG23_01530
Two-component system [BR:
sedz02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
JYG23_01530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_5
HATPase_c
SPOB_a
DXP_synthase_N
Motif
Other DBs
NCBI-ProteinID:
QSX06173
LinkDB
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Position
314632..315975
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AA seq
447 aa
AA seq
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MLMIILKIIDYLIYSISSVLIIAIFGKETKLFKKKFIVLSLLTFVIAILLFDNVNDLKKL
CIVFLILLFDAFIMCSKKIWQNLIITIFTVIIFCIASCSASYVTQYLLKIELSSIDKSYV
NYLIYIVFYYATVFAVTSILGIKNITGIVNRKISTKTHILLVIMIVLQLLRVCTEYIISI
TLASIPNLTIIPLLFYIFSLISIVLFCYCINSIINKENIIELNIKNNEKLKTYNEVLEYT
LENQRKIAHEHGNNLAVLSGYLENKNYDKAKDYVTKIIGQSCNKENSAINNIIESGLKAL
ILYKIAIFEKKGIEYEVVIDESIADLIIPSEDMCSIVGIFLDNALEASIESDEPYISISF
IKNDNMLIVTIMNSIKSSLIEKSKIFNKGYSTKGEGRGFGLNIVKDIVNRYDELELITTV
RENLLFIQELKVNKKINLSKQSVNSLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgattattctaaaaattatagattatttaatatattcaatttcgtcagtttta
ataattgctatctttggtaaagagacaaaattatttaaaaagaagtttatagtgttatca
ttactaacgtttgtcattgctatattattgtttgacaatgtaaatgatttaaaaaaatta
tgtatagtttttttaattttattatttgatgcttttattatgtgtagtaaaaaaatttgg
caaaatttaattataacaatttttactgttataatattttgtatagcaagttgttctgct
tcatacgtaactcagtatttattgaaaatagaattaagttcaattgataaaagttatgtt
aattatcttatatatattgtattttattatgctacagtatttgcagttactagtatttta
ggaattaaaaatataacaggaattgtaaatagaaagataagtacaaaaacgcatattttg
ttagttataatgattgttttacagttactaagagtatgcacggaatatataataagtatt
actttagcttctataccaaatcttaccataataccacttttgttttacattttttcattg
atatcaattgttcttttttgttattgtatcaattcaataataaacaaggaaaatattata
gagcttaatattaaaaataatgaaaagctaaaaacctataatgaagttttagaatatact
cttgaaaatcaaagaaaaattgcacatgagcatggtaataatttagctgttttatcaggc
tacttggaaaacaaaaattatgataaggcaaaagattatgtaacaaaaatcattggtcaa
tcatgtaataaagaaaatagtgctataaataatattatagaaagtggtttaaaggcatta
atattatacaaaattgcaatatttgagaaaaagggcatagaatatgaagtcgtaattgat
gaaagtattgcagatttaataattccgtcagaagacatgtgtagtatagtaggcatattc
ttagataatgcattagaagcatctattgaatcagatgaaccatatatttcaatatcattt
attaaaaatgataatatgttgatagttacgattatgaattcaattaaaagctccttgata
gaaaaatcaaaaatattcaacaaaggttattcaactaaaggagaaggtagaggttttgga
ttaaatattgtcaaagatattgttaacagatatgatgaattagaacttattacaactgtg
agagaaaatttattatttattcaagaacttaaagtaaacaaaaaaataaatttaagtaaa
caatcagtaaactcattagattaa
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