Sedimentibacter sp. zth1: JYG23_01930
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Entry
JYG23_01930 CDS
T07110
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00470
D-Amino acid metabolism
sedz00550
Peptidoglycan biosynthesis
sedz01100
Metabolic pathways
sedz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYG23_01930
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYG23_01930
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYG23_01930
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
JYG23_01930
Enzymes [BR:
sedz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JYG23_01930
Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
Precursor biosynthesis
Amino acid ligase
JYG23_01930
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Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QSX06245
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All DBs
Position
392491..393648
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AA seq
385 aa
AA seq
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MKKIIGILIGGKSVEHEVSIVTGLQVFDNIDREKYEPVMIYINSDGKWFIGKCLNNINNY
KSKSLDDAIEVIPYGVNQRLVLVENCKKRRSLFSKNSKQVVIDIVFPAVHGTNCEDGTLH
GFFQMNNIPCAFGNTLSSAIGMDKVIMKKIFKSDGLPIPDFTWFYNNEYIDNAQIVLDNA
EKLGYPLIVKPSNLGSSVGINKASNRNELIFAIEVALSYDKKIIIEECIENAREINCAIL
GYENYLVSSMCEEPLGWKDFLTFEDKYMSGEKNSDIEKRKIPADIDTKATENIKKYAKQA
FKSIDCEGNARIDFLYDGNNIYINEINTIPGSIAFYMWEYSQIKFSELITKILDIAEICN
NDRASKIINYDIDLLNNMTKYNKCK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaataattggaattttaataggtggaaaatcggttgagcatgaagtttctatt
gttacaggtttacaagtatttgataatattgacagagaaaaatatgaaccagttatgata
tatattaatagtgatggaaaatggttcattggaaaatgcttaaataatatcaataattat
aaaagtaagtcattggatgatgcaatagaagttataccatatggagttaatcaaagactt
gtattagtagaaaattgtaaaaaaaggcgaagtttgttttcaaagaattctaaacaagta
gttatagacattgtatttccagccgttcatggaacaaattgtgaagatggaacattacat
ggctttttccaaatgaacaacataccatgtgcttttggaaatacacttagctctgcaatt
ggtatggataaggtaataatgaaaaaaatatttaaatcagatggattaccaatacctgat
tttacttggttttataataatgaatatatagataatgcacaaatagtattggataatgca
gaaaaacttgggtatccactaattgttaaaccttcaaatttaggatctagtgttggtatt
aataaagctagcaatagaaatgagttgatatttgctattgaggttgcattgtcatatgat
aaaaaaattataatagaagagtgtattgaaaatgcaagagaaattaattgtgctatactg
ggatatgaaaattatcttgtatcttcaatgtgcgaagaacctcttggctggaaagatttt
ctgacatttgaggataagtatatgagtggagaaaaaaatagcgatattgaaaaaagaaaa
ataccagcagatatagacacaaaagcaactgaaaatattaagaaatatgcaaaacaagct
tttaaatcaattgattgcgaaggaaatgctagaatagattttttgtatgatggtaataat
atttatattaatgaaattaatacaataccaggttcaatagcattttatatgtgggaatat
tcacaaattaaatttagtgaactaattactaaaatacttgatattgcagaaatttgcaac
aatgatagagcttcaaaaataataaattatgatatagatttgttaaacaatatgacaaag
tataataaatgcaagtaa
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