Sedimentibacter sp. zth1: JYG23_02040
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Entry
JYG23_02040 CDS
T07110
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedz02000
]
JYG23_02040
Transporters [BR:
sedz02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
JYG23_02040
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Gene cluster
GFIT
Motif
Pfam:
MatE
MurJ
Phage_holin_3_7
Motif
Other DBs
NCBI-ProteinID:
QSX06263
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Position
complement(417313..418614)
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AA seq
433 aa
AA seq
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MSDKKQFYRFVIPSIGSMLVTGLYFVVDGIFVGRGVGTNGLAAVNIAVPFISLLTAISMM
ITMGGATLTSISFGKGENKKANNYFNTSLLLVLLFSLGMTAISVLFPTQLVKFLGASNML
IESTATYLKYYVIFGIFLCGSSTLSAFVRNDGNPQLAFWGMIIGAISNVFFDWLFIFPLQ
MGIKGAAIASGLGQILACIVLSAHFMCRKGVLKIETIAREKGIITQIIKAGIPEFVTQMS
QPVTILCYNNIVLNTFGEIGVSAFSVISYIIVVILAVFIGLAQGIQPLLSRSIGEGNREK
ENFFFQKGLQFNILLSCIIYLIMLIFGKAIISIFNNDAELIKTAYNCIIIYGISFIFASV
NIVYTTYNLATKNTKVAMMIAVLRSFICNSIFIFLMPALFGINMVWTGMIVAELVVMIIA
ITQNKKSKEASLI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaaaacaattttacagatttgtaatcccgtctataggctctatgcttgta
acgggactttattttgttgttgatggaatatttgtaggtaggggtgttggaacaaacggg
cttgctgctgttaatattgcagttcctttcatctcacttcttacagcaatatctatgatg
attacaatgggaggagcaactcttacttctatttcttttggtaaaggtgaaaacaaaaaa
gcaaataattattttaatacaagtttattattagtcctactattctcgctaggtatgact
gctatcagcgttttgttccctacacagctggtgaaatttttaggtgcaagtaacatgctt
atagaaagtacagccacttatctaaaatattatgtaatatttggaattttcctctgtggt
tcgtcaacactgtctgcctttgtcagaaatgacggtaatccacaacttgctttttgggga
atgattataggcgcaataagcaatgttttttttgattggctctttattttcccattgcag
atgggaataaaaggggctgctattgcttctggattaggtcaaattttggcgtgtattgta
ttatctgctcattttatgtgcagaaaaggtgttcttaaaattgagacaattgctagagaa
aaaggcataattactcagattattaaagcagggattcctgaatttgtcacacagatgagt
cagccggtaacaattctttgttataataatattgtcttaaatacttttggagaaatcggt
gtttctgccttttcggtaatttcctatataattgtcgttatccttgctgtctttatagga
ttggcacagggtatacagccattactcagccgtagtatcggagagggcaatagggaaaaa
gaaaattttttctttcagaaaggtttacaatttaacatattgctttcgtgtattatctat
ttgataatgcttatatttggaaaagccattatatccatatttaacaatgatgcagaactc
ataaaaacagcctataattgcataataatttacggtatttcgtttatattcgcatctgtt
aatattgtatacactacctataaccttgctactaaaaatacaaaagttgctatgatgata
gcagtgcttcgaagttttatatgcaatagtatttttatatttttaatgccagctttattt
ggaataaatatggtgtggactggaatgattgttgccgaattggtagttatgataattgca
attacacaaaacaaaaagtccaaggaggcttctctgatataa
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