Sedimentibacter sp. zth1: JYG23_02115
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Entry
JYG23_02115 CDS
T07110
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00730
Thiamine metabolism
sedz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYG23_02115 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sedz03009
]
JYG23_02115 (rsgA)
Enzymes [BR:
sedz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
JYG23_02115 (rsgA)
Ribosome biogenesis [BR:
sedz03009
]
Prokaryotic type
GTPases
JYG23_02115 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
GTP_EFTU
AIG1
Dynamin_N
FeoB_N
PduV-EutP
Septin
nSTAND1
RsgA_N
AAA
AAA_29
Roc
nSTAND3
AAA_7
IstB_IS21
Ras
Motif
Other DBs
NCBI-ProteinID:
QSX06278
UniProt:
A0A975AFT6
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All DBs
Position
430386..431426
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AA seq
346 aa
AA seq
DB search
MINLNEFGWNLEYAEEVKQNLIPARVIEVHRELYKVICEHGEINARLKGTFYKEIEFDDD
IPVVGDFVYLLYNQYGDSLIAKLCKRKSKFSRTDFSGHAVGYVKTIHEQVIAANFDYVFI
VVSLNHDFNMNRIERYIGAAIQSGAEPVIILTKADLNSDYEKYVQELKIQYNDIDVIAIS
SKTGFGLDILEKYLNKGKTLVFLGSSGVGKSSLVNAIAGEEIMKVNDIRESDSKGRHTTT
HRQLIMLSSKTMIIDTPGMRELGMWDAEEGIKKTYSDIDELIKQCRFSDCSHVSEPGCAV
KEAIKSGELDEDRWKRYLQLSKENRFGKQKSAYTKREKLVKKMKKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttaaatgaatttggatggaatttagaatatgcagaggaagtaaaacaaaat
ttaatccctgcgagagtaatagaggttcacagagaactatataaggtaatttgtgaacat
ggagaaattaatgcaagattaaaaggaacattttataaagaaatagaatttgatgatgat
atccctgtagtaggtgatttcgtttatttattatataatcaatatggtgattcattgatt
gcaaaactttgtaaaagaaaaagtaagttttctagaacagacttttcaggtcatgcggtt
ggatatgtaaaaacaatccatgaacaagttattgcggctaattttgattatgtctttatt
gtggtttcactaaatcacgattttaatatgaatcgtatagaaagatatataggtgcagca
attcaaagtggtgctgagccagttataatacttactaaagctgatttaaatagtgattat
gaaaaatatgtccaagaattaaaaatacaatataatgatatagatgttattgcaataagc
tctaaaactggatttgggttagatattttagaaaaatacttaaataaaggtaagactttg
gtatttttaggttcatcaggagttggtaaatcaagtcttgtcaatgcaattgcgggtgaa
gaaatcatgaaggttaatgatattcgtgagagtgattcaaagggaagacatacaactact
catagacagctaataatgctatcttctaaaaccatgataatagatacccctggtatgaga
gaacttggtatgtgggatgctgaggaaggaatcaaaaaaacttattctgatattgatgaa
ttgataaaacaatgtcgtttttctgattgttctcatgtgagtgagccaggatgtgcagta
aaagaagctataaaatctggtgagcttgacgaagatagatggaaaaggtatctccagtta
tcgaaagaaaatagatttggaaaacaaaaatcagcatatacaaaacgtgaaaaattagtt
aaaaagatgaagaaacgataa
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