Sedimentibacter sp. zth1: JYG23_02445
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Entry
JYG23_02445 CDS
T07110
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_02445
Enzymes [BR:
sedz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYG23_02445
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JYG23_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSX06341
UniProt:
A0A974XAW5
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All DBs
Position
506344..509718
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AA seq
1124 aa
AA seq
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MELKLVTGRAKTGKSTYLYNDALSKLNSNTGTNLLYVVPEQMTYSTELEIINKTNDAGLL
DLQITSFKKLEYMVFDEVGGLKLADINDYGKIMLLKQICDKSIDELKVYKKALYKDGFLR
EFNSFVKELKKNNINTKKLEEINLDGIKNELLKRKLSDIIMIYRNMESMTKDNFFDDEDK
TDYFVEIIEKSNIIKNSYIYIDNFESLIGQRLRVIKKLVEHSKGVMIALNIDNNCLGYLE
SIDDYEIFKVTYDTLRQYEKIAEELNLKIDYVKLEKSYISNCEIKAIEDNMFKISSKHFT
QDLKNVHVSSSMNNYTEIENVCKIITTLVRDKGYRYKDIAVVTAGMDMYEVNIKKVFTKF
EIPYFMDVKKDIMNNPFVKYILSILDMLNYNFKHQSVFEYFKTGFSGLDFGEVDKLENFA
LEYGIEGNRWFRKFTMNHIDVDYYENLRKKFAKDFSSLRKEFKNLKTSEDITIFLYNIFK
KHKIQEKIIQKVDEFKHTGRYELSFINTQVWNVIIDIFEQIILTSKDVEISTIQYRKILE
SGLMEIELGIIPPTLDKVVVGDLDRAFINSYKTIFLVGANEGVLLSFNSDKGLLLDEEKE
SLTKLGLSLLNTSMYNNFKDKHILYKVLTKPTENLYISYALSTVDGKALQPSLYIDKLKS
IFTRLIIDSDLSNHNEIDYVMTKKSTLEILIEKLREYIEGKPLSDIWKDVYTYYTNNSED
ISYIINSGIDYKNVVENIKNTDIDKLYGEFMKMSVSKLENYASCPFKFFMDFGIKPIQRK
ELKVEYYDIGNIFHECIEKFTNEIIEKKLNIKSMQKVTVIENMESCIEQVLKENSIDNNA
LEYNERNKYIKDKIKRLLDRAAWTMISQLKKGNFKPEFTEYEIKKQIKEISKEIVLKGRI
DRIDVFEDGDNAYVNIIDYKSAKKDISLSDVINGLQLQLFVYLSSIIEGNFNIEKSVPKI
GGVFYFNIDDPLVNGDATPKEIYEEEILKELSLKGYVVEDMNVISNIDEDFEKNRTSDII
PVKLKADNTLSKTSKTLNYDEYKLILDKVEDVTKKISQRIINGEIEINPYKKDDDRTPCS
YCDYKTICQFDPSIDGNKYRSIKNSNRETIISELMLENESKSKK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaattggtaacaggaagagcaaaaacaggtaaatcgacgtatttatacaat
gatgccttaagtaaacttaattctaatacaggtacaaatttattgtatgtagttcctgaa
caaatgacatactctactgagcttgaaattataaataaaacaaatgacgctggacttttg
gatttacagataacaagctttaagaagttagaatatatggtttttgatgaagttggagga
ttgaagctcgcagatatcaatgactatggtaagataatgctattaaagcaaatttgtgat
aaaagcatagatgaattgaaggtatataagaaagccttatataaggatggatttttaaga
gaatttaactcgttcgttaaggaacttaaaaaaaataatattaataccaaaaaattagaa
gagataaatcttgatggtataaaaaacgaactattaaaaaggaaattatctgatatcatt
atgatctatagaaatatggagagtatgaccaaggacaatttctttgatgatgaagataag
actgattattttgtagaaataatagaaaagtcaaatataattaaaaattcatatatttat
atagataactttgaaagtttaattggacaaagacttagagttattaaaaaattagttgaa
cattcaaagggtgtaatgatagctctaaatattgacaacaattgtcttggatatttagaa
agtatagatgactatgaaatttttaaagttacctatgatactttaagacagtatgagaaa
atagcagaagaactcaatttgaaaatagactatgtaaaacttgaaaaatcatatatttct
aattgtgaaattaaagctattgaagataatatgtttaaaatttcttctaaacattttaca
caggatttaaaaaatgtacatgtttcttcatcaatgaataattacacagagattgaaaat
gtctgcaaaatcataactacacttgttcgagataaaggatatagatataaggatattgca
gttgttaccgcaggtatggatatgtatgaggtgaatataaaaaaagtatttactaagttc
gaaataccatattttatggatgtaaaaaaagatataatgaataatccatttgtcaaatat
attttgtcaatacttgatatgttaaactataactttaagcatcaaagtgtatttgaatat
tttaaaactggtttttcaggacttgactttggtgaggttgataaattagaaaactttgcg
cttgaatacggtatagaaggaaatagatggtttagaaaatttaccatgaatcacattgat
gttgattattatgaaaatttaagaaaaaaattcgccaaagatttctcaagcttgagaaaa
gaatttaagaatttaaagacatctgaagatataactatatttctatataacatatttaaa
aagcataaaatccaagaaaaaataatacaaaaggttgatgaatttaaacacacaggcaga
tacgaactttcatttatcaatactcaagtttggaatgtaattatagatatttttgagcag
attatattaacgagtaaagatgttgaaatatcaacaatacagtatagaaaaatattagag
tctgggttaatggaaatagaactcggaattataccaccaacattggacaaagttgtggtt
ggtgatttagacagggcgtttatcaatagttataagactatatttttagttggagcaaat
gagggagttctgttgtcatttaacagcgataaggggctattgttagatgaagagaaagaa
tcattaacgaaattaggattatctttattgaatacaagtatgtataataactttaaagat
aaacatattttgtataaggtattgacaaagccaacggaaaatttatatataagttatgca
cttagtacagttgatggaaaggctttacaaccatcactgtatatagataaattaaaatct
attttcactagacttatcatagatagtgacttatcaaatcataatgaaatagattatgtt
atgactaaaaaatccacattagagattttaatagaaaaattaagagaatatatagaaggt
aagccgcttagcgatatttggaaagacgtatatacatattatacaaataattcagaggat
atttcatatataataaatagtggtattgattataaaaatgtagtagaaaatataaaaaat
actgatattgataagctttatggagagtttatgaaaatgtctgtttctaagcttgaaaac
tatgcatcttgtccatttaaattcttcatggatttcggtattaagcctatacaacgtaaa
gaattaaaggttgaatactatgatataggcaatatatttcatgagtgtatagaaaaattt
actaatgaaattattgaaaaaaaacttaatataaaaagtatgcagaaagttactgttata
gaaaatatggaaagctgtattgaacaagtattgaaagaaaatagtatagataataatgct
ttagaatataatgaacgaaataaatatataaaggataaaatcaaaagacttttagatagg
gcagcatggacaatgataagtcagctgaaaaaaggtaatttcaaacctgaatttacagaa
tatgagattaaaaagcaaattaaggaaatatcaaaagaaatagttcttaaaggtagaatt
gatagaatagatgtgtttgaagatggtgataatgcttatgtaaatattatcgactataaa
tctgctaaaaaagatatttctttgagcgatgttataaatggattacaactacagctattt
gtatatttgtcttcaattatagagggtaactttaatattgaaaaatcagtacctaaaatt
gggggtgttttctattttaacatcgatgatcctctagtcaatggagatgcaacacctaag
gaaatatatgaagaagaaatacttaaggagttatcattaaagggttacgtagtagaggat
atgaatgttatatctaatatagatgaagattttgaaaaaaacaggacatcagatatcata
cctgtaaaattaaaggcggataatactctatctaaaacttcaaagactcttaattatgat
gaatacaagcttatacttgataaagttgaagatgtaactaaaaaaatatcacaacgaatt
attaatggtgaaatagaaataaacccatacaaaaaagatgacgatagaaccccttgttca
tattgtgactataaaactatctgtcagtttgatccgtctattgatggaaataaatataga
agtattaaaaattcaaatagagaaacaataattagcgaattaatgcttgaaaatgagagt
aaatcgaagaaataa
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