Sedimentibacter sp. zth1: JYG23_02580
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Entry
JYG23_02580 CDS
T07110
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00730
Thiamine metabolism
sedz00900
Terpenoid backbone biosynthesis
sedz01100
Metabolic pathways
sedz01110
Biosynthesis of secondary metabolites
Module
sedz_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYG23_02580
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JYG23_02580
Enzymes [BR:
sedz01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
JYG23_02580
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
TPP_enzyme_C
Transketolase_N
E1_dh
Transketolase_C_1
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
QSX06365
UniProt:
A0A974XD33
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Position
537311..539185
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AA seq
624 aa
AA seq
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MNNILSKINTPEDLYNLSYKEMDVLSSEIREYLIDVVSKTGGHLASNLGVVELTIALEYA
FNLERDKIIWDVGHQAYIHKILTGRKDKMYSIRQLGGISGFPKREESKYDIFDTGHSSTS
ISAAIGVARARDLNKYNYNVVSVIGDGALTGGMAFEALNDIGKTKTKVIVVLNDNEMSIS
KNVGGLSTHLSIVRSRTRYLTTKKDLESFLEKAPIIGKYIRKFLHTIKEGIKKMIIPSML
FEEIGFTYLGPIDGHDIEDLVEVFENAKNIDGPVLIHVCTKKGKGYKYAEEKPNNYHGVS
PFDIETGLPLKKSNAKSYSKVFGDKLCEIAKTNKKVVAISAAMIQGTGLDKFSKMYRDRV
FDVGIAEQHAVTMAAGMAVNGVTPVVALYSSFLQRAYDQVVHDVATQNLHVVFAIDRAGI
VGNDGETHQGVFDTGFLVQIPNMIVMAPCDNQELEDMLEFAVNKHKGPISLRYPRGNSNL
MVPKSYKQIELGKGVMLKEGKDITIVAYGKMIEIAIQVSDILSSKNISNEIINLRFLKPL
DMALVNKSLSKTKNLLIIEETSIDASISYKIKSLIDSDINMENIIIKSFPDKFIRHGNVN
DIFDKYELNAQCISKEIENLIIKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatattatcaaagattaacacaccagaagatttatataatttaagttataag
gaaatggacgtgttatctagtgaaataagagaatacttgatagatgtagtttctaagacg
ggaggacatttagcttctaatttaggagttgttgagcttacaatcgctttagagtatgca
tttaatttagagagagataaaattatatgggatgttggacatcaagcttatatacataag
atattaacgggtagaaaagataagatgtattctattagacagttaggtggcataagtggt
tttccaaagcgtgaagagagtaaatacgatatttttgatactggtcatagtagtacatct
atatcagcagctattggtgtggctagggctagagatttaaataaatataattataatgta
gtttcagttattggagatggtgcattaactggaggaatggcttttgaagctttaaacgat
attggtaaaacaaaaacaaaagttatagttgtattaaatgataatgaaatgtctatatca
aaaaatgttggtgggttatctacgcatttaagtattgtaagatcaagaactagatattta
actacaaaaaaagatttggaaagttttttagaaaaagctcctattataggaaaatatata
agaaaatttcttcatacaatcaaagagggtataaaaaagatgattatacctagtatgtta
tttgaagaaatcggatttacttatttaggtccgattgatggacacgatatagaggattta
gttgaagtatttgaaaatgcaaaaaatatagatggacctgtacttatacatgtttgcaca
aaaaaaggtaaaggatataaatatgcagaggaaaagccaaataattatcatggcgtatct
ccatttgatatagaaacaggattgccattgaaaaaatctaatgctaaatcttattctaaa
gtatttggagataagctttgtgaaatagcaaaaacaaataagaaagttgtagctatatct
gctgcaatgattcagggtacaggactagataaattttcgaaaatgtatagagacagagtt
tttgatgttggaatagctgaacagcatgcagttactatggctgctggaatggcagtaaac
ggtgtaacaccggttgttgcattgtattcatcttttttacaaagagcatatgaccaagta
gttcacgatgtagcgacgcaaaatcttcatgtagtttttgcgatagatagagcaggtata
gttggaaatgatggtgaaactcatcaaggtgtatttgatacaggatttttagttcaaata
ccaaatatgatagttatggcaccttgtgataatcaagagttagaggatatgctagaattt
gcagtaaataaacataaaggacctatttctttaaggtatccaagagggaattctaatttg
atggttcctaaatcttataaacaaatagagcttggtaaaggtgttatgttgaaagaaggt
aaggacataacaattgttgcatatggtaaaatgatagaaattgctatacaagtaagtgat
attttaagtagtaaaaatatatcaaatgaaattataaacctacgatttttaaaaccttta
gatatggctttagtcaataaatctttaagtaaaactaaaaatctactgattatagaggaa
acatcgatagatgcatctatttcttacaaaatcaaatcattaattgatagtgatataaat
atggaaaatataataattaaatcattccctgataaatttattagacatggaaatgttaat
gatatatttgataagtatgaattgaatgcacaatgtatatcaaaagaaatagaaaattta
attattaagaaataa
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